Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gm24613-201ENSMUST00000083266 130 ntBASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gm9403-201ENSMUST00000196299 2181 ntBASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gm26876-201ENSMUST00000180875 2387 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
Usp39Q3TIX9 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm3772-201ENSMUST00000221404 1887 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Glrx-201ENSMUST00000022082 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm22470-201ENSMUST00000104117 130 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm25276-201ENSMUST00000104300 124 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm25631-201ENSMUST00000104390 130 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm12998-201ENSMUST00000122445 789 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm2709-201ENSMUST00000142979 350 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm25180-201ENSMUST00000157746 115 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm6434-201ENSMUST00000163316 372 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm4540-201ENSMUST00000170669 429 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm22132-201ENSMUST00000175316 100 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm26179-201ENSMUST00000177723 132 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm28416-201ENSMUST00000188334 292 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm29230-201ENSMUST00000189687 412 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm9517-201ENSMUST00000195021 874 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm21054-201ENSMUST00000203981 380 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm38840-201ENSMUST00000204716 843 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm44837-201ENSMUST00000206863 717 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm45478-201ENSMUST00000209472 211 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 AC117949.1-201ENSMUST00000225547 419 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm6999-201ENSMUST00000180427 2658 ntTSL 2 BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Cmah-208ENSMUST00000224819 9482 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm10743-201ENSMUST00000219611 2358 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm2108-201ENSMUST00000165058 2177 ntBASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Usp39Q3TIX9 Gm45516-201ENSMUST00000211588 4182 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm5702-201ENSMUST00000185629 2469 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm36930-201ENSMUST00000195431 2376 ntBASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Rdh11-203ENSMUST00000161204 3262 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Usp39Q3TIX9 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 220 ms