Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 AC093022.3-201ENSMUST00000226569 1926 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm13176-201ENSMUST00000117910 477 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm11445-201ENSMUST00000119101 532 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm15349-201ENSMUST00000121154 204 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm13669-201ENSMUST00000122366 457 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm37189-201ENSMUST00000192131 298 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 AC117240.1-201ENSMUST00000199436 61 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm9800-201ENSMUST00000052615 336 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm22581-201ENSMUST00000083735 136 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm6011-201ENSMUST00000211736 1796 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Olfr1239-202ENSMUST00000216762 1643 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.02□□□□□ -1.45
Nkx3-1P97436 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Nkx3-1P97436 Colec10-201ENSMUST00000036737 4587 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Mir1953-201ENSMUST00000157866 89 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Mir5617-201ENSMUST00000176786 57 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Mir7082-201ENSMUST00000183526 92 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Mir6244-201ENSMUST00000184156 117 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm27186-201ENSMUST00000184223 307 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm38068-201ENSMUST00000192546 540 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm43141-201ENSMUST00000199695 274 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm19175-201ENSMUST00000199895 916 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm18012-201ENSMUST00000204558 773 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm44833-201ENSMUST00000208368 331 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm18789-201ENSMUST00000216115 550 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Nkx3-1P97436 Gm46231-201ENSMUST00000220152 314 ntBASIC6.01□□□□□ -1.45
Nkx3-1P97436 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.01□□□□□ -1.45
Nkx3-1P97436 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms