Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Cxcl12P40224 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Cxcl12P40224 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Cxcl12P40224 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 4933411E08Rik-201ENSMUST00000217950 1689 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 4833420G17Rik-203ENSMUST00000224312 3406 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
Cxcl12P40224 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.15□□□□□ -1.27
Cxcl12P40224 Gm7435-202ENSMUST00000216003 2424 ntBASIC7.15□□□□□ -1.27
Cxcl12P40224 Gm37496-201ENSMUST00000191930 2509 ntBASIC7.15□□□□□ -1.27
Cxcl12P40224 Ampd1-202ENSMUST00000155034 2913 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Klf10-202ENSMUST00000226363 2917 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Malat1-201ENSMUST00000172812 6983 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Mir760-201ENSMUST00000103257 119 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Rnu11-201ENSMUST00000104135 134 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm24888-201ENSMUST00000104387 130 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm15149-201ENSMUST00000119370 360 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm13489-201ENSMUST00000121234 971 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Rps29-ps-201ENSMUST00000122083 172 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm37430-201ENSMUST00000193039 196 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm7343-201ENSMUST00000194510 1061 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm19024-201ENSMUST00000194681 1319 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm45899-201ENSMUST00000212196 1276 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 AL929555.1-201ENSMUST00000215283 509 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 AC153937.1-201ENSMUST00000218734 412 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 AL669819.1-201ENSMUST00000225143 330 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Snrpd1-201ENSMUST00000002551 837 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 4930502E18Rik-201ENSMUST00000069209 1427 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Cbll1-203ENSMUST00000101499 3900 ntAPPRIS P2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Cxcl12P40224 CT025619.3-201ENSMUST00000216299 3267 ntBASIC7.14□□□□□ -1.27
Cxcl12P40224 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.14□□□□□ -1.27
Cxcl12P40224 Gm37945-201ENSMUST00000192536 4367 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Tubgcp5-201ENSMUST00000032627 3905 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Tmprss11e-201ENSMUST00000161306 3416 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Amy2b-201ENSMUST00000120184 1577 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 AC139750.1-201ENSMUST00000223962 1300 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm11504-201ENSMUST00000120211 173 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm23426-201ENSMUST00000122483 318 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Dnah2os-201ENSMUST00000124108 859 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm22523-201ENSMUST00000158696 100 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Mir5112-201ENSMUST00000174897 60 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm15257-201ENSMUST00000177680 883 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm15252-201ENSMUST00000177750 883 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm15256-201ENSMUST00000177793 883 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm15260-201ENSMUST00000179402 883 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm6693-201ENSMUST00000189583 813 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm44770-201ENSMUST00000205395 1264 ntBASIC7.13□□□□□ -1.27
Cxcl12P40224 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC7.13□□□□□ -1.27
Cxcl12P40224 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC7.13□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 126.5 ms