Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC7.75□□□□□ -1.17
Col2a1P28481 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm6074-201ENSMUST00000193340 451 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm36448-201ENSMUST00000199916 438 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm9240-201ENSMUST00000206527 742 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC7.75□□□□□ -1.17
Col2a1P28481 Gm5514-201ENSMUST00000060477 306 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm6436-201ENSMUST00000077163 451 ntBASIC7.75□□□□□ -1.17
Col2a1P28481 Gm15930-201ENSMUST00000156603 2037 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Csmd2-205ENSMUST00000184063 13555 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm4806-201ENSMUST00000222704 1690 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Olfr544-201ENSMUST00000051201 3270 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Col2a1P28481 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Sptan1-201ENSMUST00000046257 7820 ntTSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm43864-201ENSMUST00000204452 4028 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Osbpl9-216ENSMUST00000161363 2356 ntTSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm10693-201ENSMUST00000144146 2037 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Col2a1P28481 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm12140-201ENSMUST00000121214 544 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Gm15502-201ENSMUST00000121449 208 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Gm12630-201ENSMUST00000121575 784 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm25219-201ENSMUST00000157545 330 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm19840-201ENSMUST00000169624 882 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm18849-201ENSMUST00000189861 560 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Gm18952-201ENSMUST00000194471 846 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Gm43160-201ENSMUST00000196453 421 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Olfr923-204ENSMUST00000219798 1068 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 AC163621.3-201ENSMUST00000221738 1033 ntTSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Olfr923-201ENSMUST00000051238 1068 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col2a1P28481 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm10205-201ENSMUST00000087431 234 ntBASIC7.74□□□□□ -1.17
Col2a1P28481 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col2a1P28481 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col2a1P28481 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Col2a1P28481 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm24272-201ENSMUST00000102329 98 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Gm24888-201ENSMUST00000104387 130 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm25782-201ENSMUST00000122526 289 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm26557-201ENSMUST00000180756 493 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Gm9658-201ENSMUST00000182757 1012 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm19087-201ENSMUST00000191430 946 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Ighv1-14-201ENSMUST00000194015 402 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Gm5055-201ENSMUST00000215697 581 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC7.73□□□□□ -1.17
Col2a1P28481 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC7.73□□□□□ -1.17
Col2a1P28481 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 AC125117.2-201ENSMUST00000228344 1140 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.73□□□□□ -1.17
Col2a1P28481 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Col2a1P28481 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Col2a1P28481 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms