Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC6.08□□□□□ -1.44
P20040 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.08□□□□□ -1.44
P20040 Gm2709-201ENSMUST00000142979 350 ntBASIC6.08□□□□□ -1.44
P20040 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.08□□□□□ -1.44
P20040 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC6.08□□□□□ -1.44
P20040 Gm25505-201ENSMUST00000157220 246 ntBASIC6.08□□□□□ -1.44
P20040 Gm23077-201ENSMUST00000157854 116 ntBASIC6.08□□□□□ -1.44
P20040 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC6.08□□□□□ -1.44
P20040 Gm17786-201ENSMUST00000182000 427 ntBASIC6.08□□□□□ -1.44
P20040 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC6.08□□□□□ -1.44
P20040 Gm29214-201ENSMUST00000190216 570 ntBASIC6.08□□□□□ -1.44
P20040 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC6.08□□□□□ -1.44
P20040 Gm43926-201ENSMUST00000203978 430 ntBASIC6.08□□□□□ -1.44
P20040 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.08□□□□□ -1.44
P20040 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.08□□□□□ -1.44
P20040 Gm46311-201ENSMUST00000217971 203 ntBASIC6.08□□□□□ -1.44
P20040 AC151901.1-201ENSMUST00000218274 180 ntBASIC6.08□□□□□ -1.44
P20040 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC6.08□□□□□ -1.44
P20040 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.08□□□□□ -1.44
P20040 Gm18960-201ENSMUST00000222962 713 ntBASIC6.08□□□□□ -1.44
P20040 Ceacam14-201ENSMUST00000023953 1109 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Olfr1364-201ENSMUST00000057453 945 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
P20040 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
P20040 Tcl1b2-201ENSMUST00000081379 1009 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
P20040 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 AC154406.1-201ENSMUST00000215220 2529 ntBASIC6.08□□□□□ -1.44
P20040 1700024B05Rik-201ENSMUST00000064162 1576 ntAPPRIS P5 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.08□□□□□ -1.44
P20040 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Gm6614-203ENSMUST00000181791 2450 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
P20040 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.08□□□□□ -1.44
P20040 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
P20040 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
P20040 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
P20040 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.08□□□□□ -1.44
P20040 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.08□□□□□ -1.44
P20040 Gm37913-201ENSMUST00000192925 2544 ntBASIC6.07□□□□□ -1.44
P20040 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
P20040 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.07□□□□□ -1.44
P20040 Med23-202ENSMUST00000092646 5098 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Dock10-209ENSMUST00000190983 6672 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm22671-201ENSMUST00000104420 134 ntBASIC6.07□□□□□ -1.44
P20040 Gm14904-201ENSMUST00000117067 335 ntBASIC6.07□□□□□ -1.44
P20040 Gm11972-201ENSMUST00000118514 389 ntBASIC6.07□□□□□ -1.44
P20040 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.07□□□□□ -1.44
P20040 Gm12903-201ENSMUST00000121015 544 ntBASIC6.07□□□□□ -1.44
P20040 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm16330-201ENSMUST00000128324 297 ntBASIC6.07□□□□□ -1.44
P20040 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC6.07□□□□□ -1.44
P20040 Gm11962-201ENSMUST00000145746 255 ntBASIC6.07□□□□□ -1.44
P20040 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC6.07□□□□□ -1.44
P20040 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Gm23018-201ENSMUST00000177928 109 ntBASIC6.07□□□□□ -1.44
P20040 Gm7426-201ENSMUST00000179046 404 ntBASIC6.07□□□□□ -1.44
P20040 Gm23139-201ENSMUST00000179454 132 ntBASIC6.07□□□□□ -1.44
P20040 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
P20040 Gm28580-201ENSMUST00000186767 88 ntBASIC6.07□□□□□ -1.44
P20040 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC6.07□□□□□ -1.44
P20040 Gm21054-201ENSMUST00000203981 380 ntBASIC6.07□□□□□ -1.44
P20040 Gm43905-201ENSMUST00000204516 204 ntBASIC6.07□□□□□ -1.44
P20040 Gm44861-201ENSMUST00000208325 1220 ntBASIC6.07□□□□□ -1.44
P20040 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
P20040 Olfr1500-206ENSMUST00000217079 1025 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
P20040 Gm9315-201ENSMUST00000222696 908 ntBASIC6.07□□□□□ -1.44
P20040 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 AC163660.1-201ENSMUST00000223696 818 ntBASIC6.07□□□□□ -1.44
P20040 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.07□□□□□ -1.44
P20040 CT009711.2-202ENSMUST00000224538 973 ntBASIC6.07□□□□□ -1.44
P20040 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
P20040 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
P20040 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC6.07□□□□□ -1.44
P20040 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
P20040 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Syt14-203ENSMUST00000195354 7882 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
P20040 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.07□□□□□ -1.44
P20040 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Mbnl2-203ENSMUST00000226800 3328 ntBASIC6.07□□□□□ -1.44
P20040 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
P20040 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
P20040 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
P20040 Foxp1-204ENSMUST00000113322 7177 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
P20040 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.06□□□□□ -1.44
P20040 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.06□□□□□ -1.44
P20040 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
P20040 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms