Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sdc1P18828 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sdc1P18828 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sdc1P18828 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr1377-202ENSMUST00000213291 2441 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sdc1P18828 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm44141-201ENSMUST00000204231 1583 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm12904-201ENSMUST00000117451 1399 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm25760-201ENSMUST00000103989 132 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm25631-201ENSMUST00000104390 130 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm13521-201ENSMUST00000118922 866 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm9434-201ENSMUST00000118975 813 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm15481-201ENSMUST00000120264 539 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC5.48□□□□□ -1.53
Sdc1P18828 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm6918-201ENSMUST00000167622 1222 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm15251-201ENSMUST00000177947 883 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm29126-201ENSMUST00000188686 151 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm8010-201ENSMUST00000194128 873 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37339-201ENSMUST00000194142 392 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Rarres2-205ENSMUST00000204930 681 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
Sdc1P18828 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm45478-201ENSMUST00000209472 211 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm6562-201ENSMUST00000221903 464 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 AC163660.3-202ENSMUST00000224917 464 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Cacna2d3-208ENSMUST00000225985 918 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Sdc1P18828 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sdc1P18828 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm7562-201ENSMUST00000210502 2537 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Sdc1P18828 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sdc1P18828 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sdc1P18828 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.48□□□□□ -1.53
Sdc1P18828 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sdc1P18828 Gm15475-201ENSMUST00000137673 3757 ntTSL 2 BASIC5.47□□□□□ -1.53
Sdc1P18828 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm10773-201ENSMUST00000218071 3935 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 4930555F03Rik-202ENSMUST00000126285 3604 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Dnah2-201ENSMUST00000035539 13569 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sdc1P18828 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm43864-201ENSMUST00000204452 4028 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Mir697-201ENSMUST00000102316 109 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Gm23323-201ENSMUST00000104471 133 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm12740-201ENSMUST00000118794 308 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Gm13071-201ENSMUST00000122237 376 ntBASIC5.47□□□□□ -1.53
Sdc1P18828 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Sdc1P18828 Gm15324-201ENSMUST00000139397 355 ntTSL 2 BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 110.5 ms