Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Zfp820-201ENSMUST00000084141 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Tifab-201ENSMUST00000169652 3349 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Clasp2-207ENSMUST00000214522 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Hoxd3P09027 Wdr5b-201ENSMUST00000042203 1784 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Hoxd3P09027 Mirg-212ENSMUST00000183144 3797 ntTSL 5 BASIC6.59□□□□□ -1.36
Hoxd3P09027 Alg8-201ENSMUST00000098300 2039 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxd3P09027 Steap4-201ENSMUST00000115421 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxd3P09027 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxd3P09027 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxd3P09027 4930466I24Rik-201ENSMUST00000144105 2264 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Hoxd3P09027 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.59□□□□□ -1.36
Hoxd3P09027 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Pla2g6-210ENSMUST00000174021 3318 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm38366-201ENSMUST00000193127 1934 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm6554-201ENSMUST00000220592 1912 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm43657-201ENSMUST00000200336 3833 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Adam9-201ENSMUST00000084032 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 CT009536.1-201ENSMUST00000223774 2151 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Ddr2-201ENSMUST00000027985 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 AC122197.1-201ENSMUST00000220281 2142 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Perm1-201ENSMUST00000105572 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Otx2-210ENSMUST00000227404 2086 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Trps1-205ENSMUST00000183997 3627 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Zmym1-203ENSMUST00000106102 3852 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Hk1-203ENSMUST00000116238 3851 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Zfp827-201ENSMUST00000087927 2801 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Jade1-206ENSMUST00000191952 3327 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 A730065G17Rik-201ENSMUST00000217082 3335 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm22760-201ENSMUST00000102277 93 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm26156-201ENSMUST00000116999 123 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm11821-201ENSMUST00000117335 979 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm11241-201ENSMUST00000117371 896 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm11386-201ENSMUST00000117761 347 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm13087-201ENSMUST00000118298 256 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm14919-201ENSMUST00000120839 390 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm11604-201ENSMUST00000121487 742 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm8577-201ENSMUST00000122420 986 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm26271-201ENSMUST00000158349 104 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Glyatl3-201ENSMUST00000166343 873 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Ly6g6c-203ENSMUST00000174876 723 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm9167-201ENSMUST00000182469 962 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Mir7093-201ENSMUST00000184195 101 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm27353-201ENSMUST00000184712 122 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm3605-201ENSMUST00000185858 440 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm29284-201ENSMUST00000188363 255 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm28239-201ENSMUST00000190225 447 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm37313-201ENSMUST00000191673 290 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Ighv1-3-201ENSMUST00000192764 302 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm42924-201ENSMUST00000197261 185 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm42605-201ENSMUST00000199565 385 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm44267-201ENSMUST00000204132 385 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Prb3-ps-201ENSMUST00000204675 1111 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm44987-201ENSMUST00000206578 750 ntTSL 3 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm2829-201ENSMUST00000213121 499 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Olfr362-203ENSMUST00000215927 1210 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Hoxd3P09027 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm4178-201ENSMUST00000218307 649 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm2649-201ENSMUST00000218825 610 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC6.58□□□□□ -1.36
Hoxd3P09027 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 CT009556.3-201ENSMUST00000226173 513 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 AC160930.2-201ENSMUST00000226608 303 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 AC151907.1-201ENSMUST00000228812 412 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Ucn2-201ENSMUST00000052724 1155 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Glt8d2-202ENSMUST00000065815 1240 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Hoxd3P09027 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm23345-201ENSMUST00000083817 150 ntBASIC6.58□□□□□ -1.36
Hoxd3P09027 Gm26108-201ENSMUST00000083973 191 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms