Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm12075-201ENSMUST00000117426 397 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm11865-201ENSMUST00000118093 859 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm14466-201ENSMUST00000119028 451 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm12219-201ENSMUST00000119198 443 ntBASIC6.91□□□□□ -1.3
CopeO89079 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm12518-201ENSMUST00000122075 779 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.91□□□□□ -1.3
CopeO89079 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC6.91□□□□□ -1.3
CopeO89079 Gm3585-201ENSMUST00000173438 875 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
CopeO89079 Gm7481-201ENSMUST00000182020 995 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm18501-201ENSMUST00000185363 664 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm37383-201ENSMUST00000191750 745 ntBASIC6.91□□□□□ -1.3
CopeO89079 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm5305-201ENSMUST00000204010 746 ntBASIC6.91□□□□□ -1.3
CopeO89079 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm45122-201ENSMUST00000206376 784 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm45514-201ENSMUST00000211531 689 ntBASIC6.91□□□□□ -1.3
CopeO89079 Gm18914-201ENSMUST00000214625 616 ntBASIC6.91□□□□□ -1.3
CopeO89079 AC160112.1-201ENSMUST00000219139 714 ntBASIC6.91□□□□□ -1.3
CopeO89079 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CopeO89079 Gm28392-201ENSMUST00000077630 393 ntBASIC6.91□□□□□ -1.3
CopeO89079 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm23238-201ENSMUST00000083007 164 ntBASIC6.91□□□□□ -1.3
CopeO89079 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gm10388-201ENSMUST00000205001 2936 ntBASIC6.91□□□□□ -1.3
CopeO89079 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.91□□□□□ -1.3
CopeO89079 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 Gpr87-203ENSMUST00000200095 1499 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CopeO89079 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.91□□□□□ -1.3
CopeO89079 Robo2-210ENSMUST00000226478 8059 ntBASIC6.91□□□□□ -1.3
CopeO89079 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.91□□□□□ -1.3
CopeO89079 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Olfr348-204ENSMUST00000215199 3557 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CopeO89079 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Plk4-202ENSMUST00000167556 2769 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CopeO89079 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
CopeO89079 Gm24986-201ENSMUST00000104452 132 ntBASIC6.9□□□□□ -1.3
CopeO89079 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC6.9□□□□□ -1.3
CopeO89079 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Gm17149-201ENSMUST00000164712 375 ntBASIC6.9□□□□□ -1.3
CopeO89079 Gm27001-201ENSMUST00000182252 936 ntBASIC6.9□□□□□ -1.3
CopeO89079 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Gm3103-201ENSMUST00000198073 752 ntBASIC6.9□□□□□ -1.3
CopeO89079 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.9□□□□□ -1.3
CopeO89079 Gm45454-201ENSMUST00000211484 455 ntBASIC6.9□□□□□ -1.3
CopeO89079 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC6.9□□□□□ -1.3
CopeO89079 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.9□□□□□ -1.3
CopeO89079 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC6.9□□□□□ -1.3
CopeO89079 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.9□□□□□ -1.3
CopeO89079 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CopeO89079 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
CopeO89079 Gm5341-201ENSMUST00000058881 489 ntBASIC6.9□□□□□ -1.3
CopeO89079 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Snora9-201ENSMUST00000082579 133 ntBASIC6.9□□□□□ -1.3
CopeO89079 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.9□□□□□ -1.3
CopeO89079 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CopeO89079 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC6.9□□□□□ -1.3
CopeO89079 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.9□□□□□ -1.31
CopeO89079 Ifi44l-201ENSMUST00000046739 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.9□□□□□ -1.31
CopeO89079 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.9□□□□□ -1.31
CopeO89079 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.9□□□□□ -1.31
CopeO89079 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.9□□□□□ -1.31
CopeO89079 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.9□□□□□ -1.31
CopeO89079 AL607131.1-201ENSMUST00000222575 1835 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
CopeO89079 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CopeO89079 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CopeO89079 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.89□□□□□ -1.31
CopeO89079 Cnpy1-205ENSMUST00000141601 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CopeO89079 Olfr1128-201ENSMUST00000102624 936 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CopeO89079 Tdpx-ps1-201ENSMUST00000117372 597 ntBASIC6.89□□□□□ -1.31
CopeO89079 Gm11833-201ENSMUST00000118393 853 ntBASIC6.89□□□□□ -1.31
CopeO89079 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.89□□□□□ -1.31
CopeO89079 Gm15538-201ENSMUST00000121410 313 ntBASIC6.89□□□□□ -1.31
CopeO89079 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CopeO89079 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CopeO89079 Gm25969-201ENSMUST00000157166 132 ntBASIC6.89□□□□□ -1.31
CopeO89079 Gm23079-201ENSMUST00000157847 117 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms