Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28587-201ENSMUST00000187181 3005 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28112-201ENSMUST00000190898 1875 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm4991-201ENSMUST00000118899 1552 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm26377-201ENSMUST00000102184 108 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm22438-201ENSMUST00000104049 132 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Pilrb1-201ENSMUST00000110978 1020 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm13458-201ENSMUST00000118239 367 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm15030-201ENSMUST00000119804 484 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm15062-201ENSMUST00000120567 367 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm12593-201ENSMUST00000120981 743 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm16456-201ENSMUST00000174431 920 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm20702-201ENSMUST00000176181 460 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm27155-201ENSMUST00000183716 898 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Mir6912-201ENSMUST00000184456 70 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm29739-201ENSMUST00000191760 529 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm17835-201ENSMUST00000196870 499 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm7587-201ENSMUST00000207618 1021 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm33242-201ENSMUST00000212130 1057 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 AC153864.1-201ENSMUST00000218482 523 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm18629-201ENSMUST00000222496 884 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm18026-201ENSMUST00000222789 727 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Zfp263-207ENSMUST00000162207 2452 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Pcdh1F7BJK1 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Obox3-206ENSMUST00000174443 1979 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Tcf12-221ENSMUST00000185117 3986 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm24334-201ENSMUST00000104210 128 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Mup3-203ENSMUST00000107488 984 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm14854-201ENSMUST00000117758 841 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm16007-201ENSMUST00000117837 286 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm12387-201ENSMUST00000118573 955 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm15828-201ENSMUST00000119911 522 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm11387-201ENSMUST00000120266 772 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm14749-201ENSMUST00000121269 333 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm25320-201ENSMUST00000122551 324 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm23587-201ENSMUST00000157658 84 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Gm16026-202ENSMUST00000159695 772 ntBASIC6.66□□□□□ -1.34
Pcdh1F7BJK1 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 100.6 ms