Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Gm37518-201ENSMUST00000194930 2603 ntBASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Sec61a2Q9JLR1 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Psd3-203ENSMUST00000093468 1739 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 AC159476.1-201ENSMUST00000215914 1668 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm23484-201ENSMUST00000104178 131 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm14745-201ENSMUST00000118480 1096 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Mir3078-201ENSMUST00000175231 87 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Mir3473c-201ENSMUST00000175262 81 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm27617-201ENSMUST00000184321 168 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm6197-201ENSMUST00000192273 454 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Pkia-203ENSMUST00000193330 631 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm37809-201ENSMUST00000195050 931 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm18765-201ENSMUST00000203166 660 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm4602-201ENSMUST00000203198 308 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm44128-201ENSMUST00000204909 219 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Spata19-201ENSMUST00000034473 697 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Commd3-201ENSMUST00000061158 935 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm37940-201ENSMUST00000194243 3251 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.56□□□□□ -1.36
Sec61a2Q9JLR1 Olfr338-201ENSMUST00000072114 5780 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm18359-201ENSMUST00000173024 1459 ntBASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Gm24986-201ENSMUST00000104452 132 ntBASIC6.55□□□□□ -1.36
Sec61a2Q9JLR1 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms