Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm6977-201ENSMUST00000121568 512 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm22794-201ENSMUST00000157228 306 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm8065-201ENSMUST00000164048 605 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm3275-201ENSMUST00000169145 487 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm18828-201ENSMUST00000180475 857 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm27782-201ENSMUST00000185059 199 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Mir8097-201ENSMUST00000185150 119 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm18350-201ENSMUST00000187395 955 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm37884-201ENSMUST00000191857 818 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm36378-201ENSMUST00000201709 388 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm6308-201ENSMUST00000203226 313 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm44773-201ENSMUST00000207374 557 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 1700018P08Rik-201ENSMUST00000212522 1239 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Olfr1134-203ENSMUST00000213939 1015 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm18252-203ENSMUST00000215855 757 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm35412-201ENSMUST00000220437 999 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 AC154329.2-201ENSMUST00000225257 383 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 CT025525.3-201ENSMUST00000228858 366 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 4930415O20Rik-201ENSMUST00000023728 558 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm37159-201ENSMUST00000192720 3605 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 AC122357.1-201ENSMUST00000221652 1515 ntBASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Trim39Q9ESN2 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Grik1-209ENSMUST00000227986 2942 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm3203-201ENSMUST00000197670 2389 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Olfr90-203ENSMUST00000215195 3060 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Mbd5-202ENSMUST00000112745 6037 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Mir705-201ENSMUST00000102058 82 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm13454-201ENSMUST00000118166 483 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm16057-201ENSMUST00000120811 759 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm26184-201ENSMUST00000157686 131 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm23413-201ENSMUST00000175521 125 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm5539-201ENSMUST00000192177 966 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm7115-201ENSMUST00000193706 832 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm18864-201ENSMUST00000194518 1051 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm44726-201ENSMUST00000203427 217 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm8667-201ENSMUST00000211112 449 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC116589.3-202ENSMUST00000221770 649 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC116589.6-201ENSMUST00000222252 649 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC126554.3-201ENSMUST00000223131 493 ntBASIC7.41□□□□□ -1.22
Trim39Q9ESN2 AC154747.2-201ENSMUST00000225109 780 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms