Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Prep-201ENSMUST00000099858 10933 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm8279-202ENSMUST00000165713 1760 ntAPPRIS P5 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm5795-203ENSMUST00000171150 1758 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm44863-201ENSMUST00000207613 1422 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gbp2b-201ENSMUST00000029936 2823 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Mir1930-201ENSMUST00000158799 84 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Mir6241-201ENSMUST00000184225 103 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm42782-201ENSMUST00000197286 522 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gm2754-201ENSMUST00000223383 589 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 AC108947.1-201ENSMUST00000224274 1000 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 AC158537.1-201ENSMUST00000224637 1711 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Cdc40Q9DC48 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Mroh4-201ENSMUST00000023271 3583 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm43019-201ENSMUST00000196948 2863 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm13423-201ENSMUST00000117205 888 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm13798-201ENSMUST00000118285 139 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm9114-201ENSMUST00000188558 997 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm42580-201ENSMUST00000197223 753 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm24826-202ENSMUST00000197298 216 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm43849-201ENSMUST00000201086 215 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm34654-201ENSMUST00000217012 535 ntTSL 3 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm2531-201ENSMUST00000075609 512 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm23734-201ENSMUST00000083753 109 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 AC118639.1-203ENSMUST00000228425 2016 ntBASIC6.43□□□□□ -1.38
Cdc40Q9DC48 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Cdc40Q9DC48 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms