Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Malat1-201ENSMUST00000172812 6983 ntBASIC7.77□□□□□ -1.17
Trim42Q9D2H5 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim42Q9D2H5 CT025566.1-202ENSMUST00000224800 2511 ntBASIC7.77□□□□□ -1.17
Trim42Q9D2H5 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trim42Q9D2H5 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim42Q9D2H5 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trim42Q9D2H5 Gm43113-201ENSMUST00000199713 1754 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm45183-201ENSMUST00000207937 1497 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm44550-201ENSMUST00000207311 2058 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Ighv1-22-201ENSMUST00000103507 351 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Eaf2-203ENSMUST00000114825 668 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm13771-201ENSMUST00000117988 238 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm8662-201ENSMUST00000118644 574 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm14584-201ENSMUST00000118956 637 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm14989-201ENSMUST00000120497 207 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Defa-ps14-201ENSMUST00000121373 418 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 4930401O10Rik-201ENSMUST00000128489 787 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 4930599N23Rik-201ENSMUST00000146981 880 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm24685-201ENSMUST00000157764 285 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm26468-201ENSMUST00000158644 106 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm16238-201ENSMUST00000159343 586 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm6650-201ENSMUST00000166710 614 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm21241-201ENSMUST00000179551 934 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm26092-201ENSMUST00000179798 97 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Mir669a-1-201ENSMUST00000180238 97 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm19480-201ENSMUST00000185547 667 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm28489-201ENSMUST00000186655 316 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 1810026B05Rik-208ENSMUST00000190028 590 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm37185-201ENSMUST00000193852 410 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm43287-201ENSMUST00000197747 600 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm42628-201ENSMUST00000198498 764 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm7946-201ENSMUST00000203326 958 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm44277-201ENSMUST00000205128 649 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm7769-201ENSMUST00000212900 933 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC155941.3-201ENSMUST00000218476 308 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC154450.1-201ENSMUST00000220911 485 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC154851.2-201ENSMUST00000222172 644 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC155305.1-201ENSMUST00000222207 319 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC159293.1-201ENSMUST00000222662 545 ntTSL 3 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC156561.1-201ENSMUST00000224774 233 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC154323.2-201ENSMUST00000226557 1151 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 CT009556.2-201ENSMUST00000227980 1123 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC158519.1-201ENSMUST00000228615 179 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Tas2r102-201ENSMUST00000069268 1044 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm21957-201ENSMUST00000073056 438 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm22578-201ENSMUST00000083730 107 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm38218-201ENSMUST00000193555 4689 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Glb1l2-201ENSMUST00000040398 3701 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Trim42Q9D2H5 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.76□□□□□ -1.17
Trim42Q9D2H5 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Gm18451-201ENSMUST00000196759 1719 ntBASIC7.75□□□□□ -1.17
Trim42Q9D2H5 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms