Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC7.52□□□□□ -1.2
Ddx56Q9D0R4 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm44675-201ENSMUST00000208188 2927 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Phc1-208ENSMUST00000160696 4213 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm15484-201ENSMUST00000118871 828 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm12944-201ENSMUST00000119262 463 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm9697-201ENSMUST00000147052 997 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm7502-201ENSMUST00000169235 733 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm22923-201ENSMUST00000174952 110 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Mir6357-201ENSMUST00000184246 104 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm28894-201ENSMUST00000185214 615 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm8101-201ENSMUST00000192796 478 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm37369-201ENSMUST00000194179 615 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr221-203ENSMUST00000214342 1062 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 AC105167.1-201ENSMUST00000219966 253 ntTSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Mif-ps7-201ENSMUST00000223357 327 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 AC131187.2-201ENSMUST00000223936 994 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 AL844586.1-201ENSMUST00000224297 1042 ntBASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Ddx56Q9D0R4 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm14930-201ENSMUST00000118864 652 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm12410-201ENSMUST00000124989 405 ntTSL 3 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm25505-201ENSMUST00000157220 246 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm23740-201ENSMUST00000157385 100 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm10552-202ENSMUST00000161763 717 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm16026-205ENSMUST00000162923 641 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm18808-201ENSMUST00000173316 462 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Mir199b-201ENSMUST00000175066 110 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm37328-201ENSMUST00000193191 640 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 4930568A13Rik-201ENSMUST00000199961 1061 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Scn8a-207ENSMUST00000200959 587 ntTSL 3 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm45888-201ENSMUST00000212348 1229 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm9231-201ENSMUST00000220817 1009 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gm19340-201ENSMUST00000221995 345 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Gcnt2-204ENSMUST00000223570 335 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 CT009711.4-201ENSMUST00000225685 198 ntBASIC7.51□□□□□ -1.21
Ddx56Q9D0R4 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 778.1 ms