Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 A1cf-203ENSMUST00000224400 1204 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 AC174678.3-201ENSMUST00000227568 362 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Golga3-202ENSMUST00000112512 8132 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 AC123705.1-201ENSMUST00000222512 2058 ntBASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Smc1aQ9CU62 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Cyp4a10-201ENSMUST00000058785 2109 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm15422-201ENSMUST00000117453 541 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm11858-201ENSMUST00000117935 838 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm11987-201ENSMUST00000118524 381 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm11903-201ENSMUST00000118958 727 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm14990-201ENSMUST00000122354 445 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm22262-201ENSMUST00000158713 86 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Mir199b-201ENSMUST00000175066 110 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm27178-201ENSMUST00000184962 340 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm30708-201ENSMUST00000202183 312 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 CT030175.1-201ENSMUST00000220822 408 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 AC154461.5-201ENSMUST00000225429 774 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr1418-202ENSMUST00000214796 4046 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Olfr694-203ENSMUST00000216118 5035 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm38276-201ENSMUST00000192446 1343 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Gm44130-201ENSMUST00000205157 3004 ntBASIC7.76□□□□□ -1.17
Smc1aQ9CU62 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm14035-201ENSMUST00000117596 1475 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm8878-201ENSMUST00000173552 1725 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm10650-202ENSMUST00000196581 1969 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm13545-201ENSMUST00000119044 482 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm14202-201ENSMUST00000120121 311 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm6142-201ENSMUST00000120290 325 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm11343-201ENSMUST00000120579 599 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm12518-201ENSMUST00000122075 779 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm14503-201ENSMUST00000130337 1164 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Arpp19-204ENSMUST00000167885 540 ntTSL 3 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm25617-201ENSMUST00000179548 133 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm4856-201ENSMUST00000192696 1091 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm25617-202ENSMUST00000198387 132 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm18690-201ENSMUST00000204488 985 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 Gm8168-201ENSMUST00000209631 948 ntBASIC7.75□□□□□ -1.17
Smc1aQ9CU62 AC102582.2-201ENSMUST00000214658 1137 ntTSL 5 BASIC7.75□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms