Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm26784-201ENSMUST00000181666 410 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm44342-201ENSMUST00000196874 129 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm44383-201ENSMUST00000198940 129 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC187103.4-201ENSMUST00000225399 300 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm9585-201ENSMUST00000219681 1404 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC166574.5-201ENSMUST00000227438 1432 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr1038-ps-202ENSMUST00000216665 4530 ntTSL 3 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.13□□□□□ -1.43
Scrt1Q99M85 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Scrt1Q99M85 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm9506-201ENSMUST00000118516 320 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm15349-201ENSMUST00000121154 204 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm14695-201ENSMUST00000121721 282 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm2709-201ENSMUST00000142979 350 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm22795-201ENSMUST00000157233 118 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm23756-201ENSMUST00000157582 114 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm9874-202ENSMUST00000194957 1464 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm37611-201ENSMUST00000195250 2028 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm43689-201ENSMUST00000195951 427 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm42462-201ENSMUST00000196543 1363 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm30517-201ENSMUST00000197350 772 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm19088-201ENSMUST00000198800 566 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm43339-201ENSMUST00000200032 1606 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm45279-201ENSMUST00000210315 391 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 AC159205.2-201ENSMUST00000223759 816 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 AC160962.1-202ENSMUST00000225859 1116 ntAPPRIS ALT2 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Gm24451-201ENSMUST00000083353 133 ntBASIC6.12□□□□□ -1.43
Scrt1Q99M85 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scrt1Q99M85 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.11□□□□□ -1.43
Scrt1Q99M85 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scrt1Q99M85 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms