Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm38195-201ENSMUST00000194247 1499 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm38262-201ENSMUST00000194760 1382 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm15842-201ENSMUST00000120513 618 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm13649-201ENSMUST00000122325 606 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm6465-201ENSMUST00000168154 1098 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm4252-201ENSMUST00000174823 313 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm9399-201ENSMUST00000175771 639 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm24307-201ENSMUST00000178512 101 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm7560-201ENSMUST00000187748 873 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm37319-201ENSMUST00000193500 636 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm44743-201ENSMUST00000209062 386 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC163667.1-201ENSMUST00000225201 1289 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC124196.1-201ENSMUST00000225970 1032 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 AC122397.3-201ENSMUST00000227097 527 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm7086-202ENSMUST00000228849 506 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Vmn1r37-201ENSMUST00000077482 909 ntAPPRIS P2 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Olfr120-201ENSMUST00000077498 993 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm43031-201ENSMUST00000198500 1887 ntBASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Il18bp-201ENSMUST00000094134 1311 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Kcnc2-202ENSMUST00000218445 4033 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Map2-205ENSMUST00000114015 5440 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Ccdc9Q8VC31 Gm45179-201ENSMUST00000208452 4337 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm29666-201ENSMUST00000189185 8038 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 AC156636.2-201ENSMUST00000218845 4557 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 AC124579.1-201ENSMUST00000223468 2520 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Trappc1-202ENSMUST00000102601 759 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm12106-201ENSMUST00000116006 1200 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm13255-201ENSMUST00000117255 547 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Rpl19-ps9-201ENSMUST00000205423 588 ntBASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Ccdc9Q8VC31 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms