Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm24473-201ENSMUST00000104483 131 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Grm8-202ENSMUST00000115323 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm13137-201ENSMUST00000118035 345 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm11517-201ENSMUST00000119491 387 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm15129-201ENSMUST00000119673 279 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Il15ra-210ENSMUST00000128156 1624 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm25025-201ENSMUST00000175018 111 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm9710-201ENSMUST00000198053 499 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm44112-201ENSMUST00000204787 372 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm2774-201ENSMUST00000213650 1165 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Gm7731-201ENSMUST00000091759 470 ntBASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
Prpf39Q8K2Z2 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm26645-201ENSMUST00000181076 1316 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 CT030185.2-201ENSMUST00000222614 1310 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm11864-201ENSMUST00000116179 1220 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm14865-201ENSMUST00000117523 494 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm11858-201ENSMUST00000117935 838 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm15242-201ENSMUST00000122459 283 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm15872-201ENSMUST00000162454 1108 ntTSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm38170-201ENSMUST00000195404 816 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm8182-201ENSMUST00000197863 769 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm9357-201ENSMUST00000207138 805 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm3678-201ENSMUST00000218888 492 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC131795.1-201ENSMUST00000219632 426 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC131117.2-202ENSMUST00000224539 547 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC154834.1-201ENSMUST00000224697 358 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Mir296-201ENSMUST00000083587 79 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Mir484-201ENSMUST00000093566 67 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 AC129308.2-203ENSMUST00000224109 2385 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Gm14935-201ENSMUST00000121528 1708 ntBASIC7.13□□□□□ -1.27
Prpf39Q8K2Z2 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Gm28379-202ENSMUST00000187676 2896 ntBASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Gm37278-201ENSMUST00000191619 2872 ntBASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Prpf39Q8K2Z2 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms