Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm22795-201ENSMUST00000157233 118 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm22588-201ENSMUST00000157510 140 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm16297-201ENSMUST00000161466 459 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm3208-201ENSMUST00000168281 427 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm17790-201ENSMUST00000191545 1228 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm37349-201ENSMUST00000194205 624 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm7285-201ENSMUST00000198801 580 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm44982-201ENSMUST00000208795 471 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm2767-201ENSMUST00000209582 473 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 AC133958.1-201ENSMUST00000227085 961 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 4933424M12Rik-201ENSMUST00000132609 1944 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm18830-201ENSMUST00000199036 1396 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Zfp667-201ENSMUST00000086327 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
CopaQ8CIE6 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm13006-201ENSMUST00000118683 214 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm13444-201ENSMUST00000119445 522 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm7746-201ENSMUST00000120966 503 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm14787-201ENSMUST00000121236 388 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm13282-201ENSMUST00000121577 545 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm12920-201ENSMUST00000121818 1186 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm15096-201ENSMUST00000121918 878 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Mir199b-201ENSMUST00000175066 110 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm5283-201ENSMUST00000177874 334 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm28877-201ENSMUST00000191349 604 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm38373-201ENSMUST00000192042 288 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm8182-201ENSMUST00000197863 769 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm43243-201ENSMUST00000199964 278 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm42883-201ENSMUST00000202594 222 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm30646-201ENSMUST00000207662 180 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm18562-201ENSMUST00000209949 915 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 AC151971.2-201ENSMUST00000217540 909 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm18112-201ENSMUST00000219862 1195 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 AC211878.5-201ENSMUST00000221697 409 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 AC158388.1-201ENSMUST00000225441 256 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm33594-201ENSMUST00000209502 1333 ntTSL 5 BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Slc15a1-201ENSMUST00000088386 3121 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm10855-201ENSMUST00000100426 2541 ntBASIC7.18□□□□□ -1.26
CopaQ8CIE6 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
CopaQ8CIE6 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.17□□□□□ -1.26
CopaQ8CIE6 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC7.17□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms