Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm25556-201ENSMUST00000158077 144 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm37629-201ENSMUST00000193635 1050 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm19185-201ENSMUST00000196365 643 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm44237-201ENSMUST00000205183 936 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm9315-201ENSMUST00000222696 908 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 AC154323.2-201ENSMUST00000226557 1151 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Mir7b-201ENSMUST00000083557 111 ntBASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Gm15318-202ENSMUST00000146320 1661 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Rab11fip3Q8CHD8 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC9.15□□□□□ -0.95
Rab11fip3Q8CHD8 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm38368-201ENSMUST00000193181 1335 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Impg1-202ENSMUST00000113250 2965 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm38244-201ENSMUST00000191737 2586 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 A730017C20Rik-205ENSMUST00000165666 1911 ntAPPRIS P2 TSL 2 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm24473-201ENSMUST00000104483 131 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm14531-201ENSMUST00000120845 285 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm9672-201ENSMUST00000166437 425 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm5050-201ENSMUST00000197164 775 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm42824-201ENSMUST00000199361 247 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm45279-201ENSMUST00000210315 391 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm3678-201ENSMUST00000218888 492 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 AC124680.1-201ENSMUST00000223923 1585 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm5454-201ENSMUST00000052030 1453 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Rab11fip3Q8CHD8 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Pde1c-207ENSMUST00000168944 2126 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Mapk9-204ENSMUST00000109178 1302 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 AC159196.3-201ENSMUST00000224307 1841 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm25093-201ENSMUST00000103993 132 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm37328-201ENSMUST00000193191 640 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm7019-201ENSMUST00000194122 369 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm44342-201ENSMUST00000196874 129 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm44383-201ENSMUST00000198940 129 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm45610-201ENSMUST00000209227 784 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm22005-201ENSMUST00000082795 141 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Mir365-2-201ENSMUST00000083555 112 ntBASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC9.13□□□□□ -0.95
Rab11fip3Q8CHD8 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms