Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm28558-201ENSMUST00000187373 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28682-201ENSMUST00000187430 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28738-201ENSMUST00000187480 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28949-201ENSMUST00000187805 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28773-201ENSMUST00000187925 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29319-201ENSMUST00000188060 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29422-201ENSMUST00000188062 694 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28734-201ENSMUST00000188104 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28787-201ENSMUST00000188357 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29312-201ENSMUST00000188724 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29451-201ENSMUST00000188862 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29637-201ENSMUST00000188877 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29033-201ENSMUST00000189114 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29614-201ENSMUST00000189263 694 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28751-201ENSMUST00000189287 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29559-201ENSMUST00000189412 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28272-201ENSMUST00000189512 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28483-201ENSMUST00000189519 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28123-201ENSMUST00000189725 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28368-201ENSMUST00000189804 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29119-201ENSMUST00000189973 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28716-201ENSMUST00000190217 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29239-201ENSMUST00000190304 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28837-201ENSMUST00000190397 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28968-201ENSMUST00000190413 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28531-201ENSMUST00000190529 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm28165-201ENSMUST00000190669 694 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm29181-201ENSMUST00000191288 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm38229-201ENSMUST00000191931 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm32347-201ENSMUST00000192944 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm38121-201ENSMUST00000193213 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm38035-201ENSMUST00000194427 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm38350-201ENSMUST00000194789 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm37990-201ENSMUST00000195821 696 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm44823-201ENSMUST00000204775 1107 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 AC131795.1-201ENSMUST00000219632 426 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm7986-201ENSMUST00000221336 551 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 AC154834.1-201ENSMUST00000224697 358 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm14935-201ENSMUST00000121528 1708 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Brf1Q8CFK2 CT030185.2-201ENSMUST00000222614 1310 ntBASIC8.28□□□□□ -1.08
Brf1Q8CFK2 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.27□□□□□ -1.08
Brf1Q8CFK2 Gm43876-201ENSMUST00000203831 3229 ntBASIC8.27□□□□□ -1.08
Brf1Q8CFK2 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
Brf1Q8CFK2 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm37530-201ENSMUST00000191759 4932 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 CT025566.1-202ENSMUST00000224800 2511 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm24869-201ENSMUST00000104072 128 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm15310-201ENSMUST00000117891 372 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm13754-201ENSMUST00000120486 998 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm10660-201ENSMUST00000148610 1203 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm24176-201ENSMUST00000158928 121 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm8480-201ENSMUST00000190350 698 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 AC152169.2-201ENSMUST00000224558 613 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm14851-201ENSMUST00000077452 351 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm13416-201ENSMUST00000117264 1612 ntBASIC8.27□□□□□ -1.09
Brf1Q8CFK2 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Brf1Q8CFK2 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms