Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Oxtr-202ENSMUST00000204027 3721 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Pcdhga1-202ENSMUST00000194888 3247 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC8.13□□□□□ -1.11
Pcdhb7Q8CDY9 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Mpdz-203ENSMUST00000107262 7518 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Rnase13-201ENSMUST00000089771 1412 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm42534-201ENSMUST00000196063 1754 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm40309-201ENSMUST00000202699 1752 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC154630.1-201ENSMUST00000215334 2440 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC123665.5-201ENSMUST00000226648 1392 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Muc2-201ENSMUST00000026590 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Sprr2a1-201ENSMUST00000074449 3003 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC164092.3-201ENSMUST00000216970 1323 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm11876-201ENSMUST00000120002 269 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm22038-201ENSMUST00000157277 242 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm26184-201ENSMUST00000157686 131 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm24004-201ENSMUST00000158460 178 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm17068-201ENSMUST00000163135 980 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm20490-201ENSMUST00000173622 198 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm21754-201ENSMUST00000177550 479 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm18828-201ENSMUST00000180475 857 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm21803-201ENSMUST00000188897 693 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm28567-201ENSMUST00000190270 693 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm37044-201ENSMUST00000193531 693 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm38041-201ENSMUST00000194445 661 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm38369-201ENSMUST00000195101 693 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm9245-201ENSMUST00000200528 983 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC124399.1-201ENSMUST00000218334 590 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC192334.2-201ENSMUST00000223087 1091 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC126691.2-201ENSMUST00000226185 249 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC110236.1-201ENSMUST00000227807 527 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 AC171241.2-201ENSMUST00000228744 892 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 CT030662.3-201ENSMUST00000228751 476 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm23378-201ENSMUST00000082942 107 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Vmn1r61-201ENSMUST00000164880 1818 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Fbxw7-202ENSMUST00000107675 3599 ntAPPRIS ALT1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm44763-201ENSMUST00000208287 2019 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Gm44873-201ENSMUST00000208490 3428 ntBASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Pcdhb7Q8CDY9 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms