Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm13983-201ENSMUST00000118018 865 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm12242-201ENSMUST00000118824 738 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm4911-201ENSMUST00000119388 945 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm15311-201ENSMUST00000119682 282 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm15305-201ENSMUST00000120354 288 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm11553-201ENSMUST00000120682 240 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm14353-201ENSMUST00000122200 869 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm11940-201ENSMUST00000153599 417 ntTSL 3 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm22523-201ENSMUST00000158696 100 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm20691-201ENSMUST00000176889 333 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm20690-201ENSMUST00000177341 315 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm20615-201ENSMUST00000177503 705 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700028B04Rik-201ENSMUST00000186274 555 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm28117-201ENSMUST00000188472 371 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm7867-201ENSMUST00000189856 546 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm43160-201ENSMUST00000196453 421 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm5711-201ENSMUST00000197896 421 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm43089-201ENSMUST00000199162 275 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm4585-201ENSMUST00000207218 452 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm45899-201ENSMUST00000212196 1276 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 AC165106.1-201ENSMUST00000227580 408 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 AC154640.1-202ENSMUST00000227828 496 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Mkl2-204ENSMUST00000149359 8295 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Olfr1390-202ENSMUST00000215014 2875 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.24□□□□□ -1.09
Atg4aQ8C9S8 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm37372-201ENSMUST00000193577 3311 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm26079-201ENSMUST00000104066 133 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm23748-201ENSMUST00000104227 131 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm22132-201ENSMUST00000175316 100 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm37620-201ENSMUST00000192910 501 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm44411-201ENSMUST00000204172 349 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm18781-201ENSMUST00000211252 924 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC154558.1-201ENSMUST00000222278 415 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC125064.1-201ENSMUST00000225801 295 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC168062.1-201ENSMUST00000228048 769 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC156016.2-201ENSMUST00000228200 525 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC115735.5-201ENSMUST00000228386 397 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Mast4-201ENSMUST00000099202 7709 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm45073-201ENSMUST00000207688 4247 ntBASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Atg4aQ8C9S8 Gm37755-201ENSMUST00000195880 2179 ntBASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Atg4aQ8C9S8 Gm42763-201ENSMUST00000199595 2087 ntBASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms