Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gng7-201ENSMUST00000092285 3362 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Jarid2-210ENSMUST00000173704 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Ddx5-201ENSMUST00000021062 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm16439-201ENSMUST00000100687 564 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm24161-201ENSMUST00000104592 130 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm11258-201ENSMUST00000121086 1218 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm15373-201ENSMUST00000121495 214 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm14488-202ENSMUST00000134755 668 ntTSL 3 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Trav20-201ENSMUST00000142754 347 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm16138-201ENSMUST00000159341 821 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm4134-201ENSMUST00000173244 563 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm27024-201ENSMUST00000182561 755 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm27165-201ENSMUST00000183951 232 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm38232-201ENSMUST00000193602 411 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm7815-201ENSMUST00000196104 832 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm44451-201ENSMUST00000203767 483 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm44978-201ENSMUST00000206635 317 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 CT025603.2-201ENSMUST00000224369 484 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Pqbp1-201ENSMUST00000033497 1104 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm6960-201ENSMUST00000051629 639 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 1110012L19Rik-201ENSMUST00000053981 1094 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm7125-201ENSMUST00000093430 273 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Serpina3f-203ENSMUST00000167049 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Zfp446-203ENSMUST00000108536 3705 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Rbm5-214ENSMUST00000182659 3205 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Cd22-210ENSMUST00000189718 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Olfml1-201ENSMUST00000120990 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Plcg2-201ENSMUST00000081232 4298 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Baiap3-204ENSMUST00000182435 3758 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Tcaf2-201ENSMUST00000031879 4497 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Olfr450-202ENSMUST00000218832 1899 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Cdk16-202ENSMUST00000115364 3270 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Daam1-205ENSMUST00000223272 5835 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 C820005J03Rik-201ENSMUST00000195997 2312 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Dlg3-203ENSMUST00000113735 3692 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Rreb1-201ENSMUST00000037232 8395 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Apex2-203ENSMUST00000112720 4742 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm37125-201ENSMUST00000195877 1559 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm42540-201ENSMUST00000200319 2008 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm9992-201ENSMUST00000070059 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm44168-201ENSMUST00000204835 3539 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Dis3l2-201ENSMUST00000065694 3085 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Drosha-207ENSMUST00000169061 4570 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Cntrl-202ENSMUST00000028237 7615 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm19552-201ENSMUST00000194744 2833 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Hivep2-205ENSMUST00000191138 9846 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm12222-201ENSMUST00000121368 260 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm14162-201ENSMUST00000121985 601 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 1700112J05Rik-201ENSMUST00000129353 793 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm7799-201ENSMUST00000133080 476 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm26021-201ENSMUST00000158664 131 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm4462-201ENSMUST00000166453 492 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC9.63□□□□□ -0.87
Trim35Q8C006 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm5181-201ENSMUST00000183140 971 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm29228-201ENSMUST00000185489 418 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm44083-201ENSMUST00000203114 337 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm42402-201ENSMUST00000208341 1054 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm45705-201ENSMUST00000211831 2134 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 CT485612.3-201ENSMUST00000222179 408 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 AC129590.1-201ENSMUST00000225573 852 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 AC117656.3-202ENSMUST00000225842 1055 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm7204-201ENSMUST00000062591 600 ntBASIC9.63□□□□□ -0.87
Trim35Q8C006 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC9.63□□□□□ -0.87
Trim35Q8C006 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC9.63□□□□□ -0.87
Trim35Q8C006 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 139.2 ms