Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm14788-201ENSMUST00000119457 375 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm12642-201ENSMUST00000121098 876 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Tvp23bos-201ENSMUST00000148598 1011 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm11816-202ENSMUST00000149848 714 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm22847-201ENSMUST00000157707 105 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm24050-201ENSMUST00000158623 290 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm3102-201ENSMUST00000164236 489 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm17064-201ENSMUST00000167690 452 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm25692-201ENSMUST00000175444 125 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm22111-201ENSMUST00000178010 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm23687-201ENSMUST00000178664 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm24566-201ENSMUST00000179286 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm23305-201ENSMUST00000179342 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm26389-201ENSMUST00000179819 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm22130-201ENSMUST00000179979 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm22393-201ENSMUST00000180153 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm25085-201ENSMUST00000180298 79 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm5181-201ENSMUST00000183140 971 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Mir8114-201ENSMUST00000183582 111 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Mir6340-201ENSMUST00000183857 119 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm27156-201ENSMUST00000184589 754 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm6445-201ENSMUST00000189515 1112 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm28211-201ENSMUST00000190920 315 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm38203-201ENSMUST00000191815 245 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm43590-201ENSMUST00000195987 387 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm7733-201ENSMUST00000199038 919 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm4374-201ENSMUST00000204929 424 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm43922-201ENSMUST00000205071 328 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm20948-201ENSMUST00000211091 449 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Spata19-204ENSMUST00000214287 642 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC153957.1-201ENSMUST00000215235 229 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC162176.1-201ENSMUST00000216490 618 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC144628.1-201ENSMUST00000227943 466 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Mphosph6-201ENSMUST00000034303 1068 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm10123-201ENSMUST00000075723 490 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Mir463-201ENSMUST00000093570 75 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm45634-201ENSMUST00000209736 1990 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC154828.1-201ENSMUST00000220696 2810 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Gm37570-201ENSMUST00000195411 3106 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 AC166159.1-201ENSMUST00000227154 1380 ntBASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Pcdh19Q80TF3 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 F10-202ENSMUST00000063820 2503 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Olfr726-205ENSMUST00000215278 1324 ntAPPRIS P1 TSL 3 BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 AC132465.1-201ENSMUST00000219938 1307 ntBASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Gm36993-201ENSMUST00000192983 2980 ntBASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Rgr-201ENSMUST00000022338 4240 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Pcdh19Q80TF3 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms