Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Gm37410-201ENSMUST00000193623 3039 ntBASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Evi2a-205ENSMUST00000170799 2289 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC7.67□□□□□ -1.18
Usp49Q6P9L4 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm43187-201ENSMUST00000200652 2397 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm14865-201ENSMUST00000117523 494 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm14070-201ENSMUST00000120773 428 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm22132-201ENSMUST00000175316 100 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Smim18-201ENSMUST00000179364 587 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm28665-201ENSMUST00000189269 670 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm31659-201ENSMUST00000211989 481 ntTSL 3 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 AC102676.1-201ENSMUST00000228131 719 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Dapp1-203ENSMUST00000136613 2950 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Asb4-201ENSMUST00000043294 3286 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.66□□□□□ -1.18
Usp49Q6P9L4 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm12468-201ENSMUST00000116189 404 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm8988-201ENSMUST00000155015 1240 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm26025-201ENSMUST00000158655 271 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm24176-201ENSMUST00000158928 121 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm6264-201ENSMUST00000160802 624 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 4933417G07Rik-202ENSMUST00000199732 964 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Ghrl-202ENSMUST00000203363 400 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 1810014B01Rik-204ENSMUST00000218536 204 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Mylf-ps-201ENSMUST00000222174 421 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 AC174797.5-201ENSMUST00000225055 1860 ntBASIC7.65□□□□□ -1.18
Usp49Q6P9L4 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
Usp49Q6P9L4 Gm43873-201ENSMUST00000204505 3938 ntBASIC7.65□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms