Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Gm7961-201ENSMUST00000201338 1436 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm2178-201ENSMUST00000104927 357 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm12468-201ENSMUST00000116189 404 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm6181-201ENSMUST00000117187 264 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm9311-201ENSMUST00000118042 1269 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm12375-201ENSMUST00000119331 921 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm11882-201ENSMUST00000121463 506 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm16248-201ENSMUST00000124238 243 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC6.79□□□□□ -1.32
Lhx1P63006 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm9285-201ENSMUST00000177691 697 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Gm8524-201ENSMUST00000186232 379 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm21301-201ENSMUST00000189476 699 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm18752-201ENSMUST00000192876 608 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm43141-201ENSMUST00000199695 274 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.79□□□□□ -1.32
Lhx1P63006 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm44411-201ENSMUST00000204172 349 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
Lhx1P63006 1700021G15Rik-201ENSMUST00000217671 528 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.79□□□□□ -1.32
Lhx1P63006 AC153152.2-201ENSMUST00000223165 959 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 AC151730.1-201ENSMUST00000226106 448 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Lhx1P63006 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Sprr2a3-202ENSMUST00000193337 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Gm42597-201ENSMUST00000196663 1544 ntBASIC6.79□□□□□ -1.32
Lhx1P63006 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Lhx1P63006 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 AC135119.1-202ENSMUST00000228435 2203 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm14612-201ENSMUST00000121522 881 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm14353-201ENSMUST00000122200 869 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm26046-201ENSMUST00000157312 166 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm25574-201ENSMUST00000175245 249 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Mir7212-201ENSMUST00000184098 61 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm37068-201ENSMUST00000195168 640 ntTSL 3 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm34144-201ENSMUST00000197039 259 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm43377-201ENSMUST00000201640 455 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm44227-201ENSMUST00000203576 241 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm8667-201ENSMUST00000211112 449 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Gm2774-201ENSMUST00000213650 1165 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm17950-201ENSMUST00000214617 646 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm40645-202ENSMUST00000219828 874 ntTSL 5 BASIC6.78□□□□□ -1.32
Lhx1P63006 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Glycam1-204ENSMUST00000228895 641 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Lhx1P63006 Gm25587-201ENSMUST00000082498 166 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.78□□□□□ -1.32
Lhx1P63006 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Lhx1P63006 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms