Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Lsm6P62313 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm25546-201ENSMUST00000103977 132 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm24284-201ENSMUST00000104240 142 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm25631-201ENSMUST00000104390 130 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm24473-201ENSMUST00000104483 131 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm13900-201ENSMUST00000119402 498 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm26183-201ENSMUST00000157685 139 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm24756-201ENSMUST00000177002 96 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Crnde-205ENSMUST00000179400 651 ntTSL 2 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm18848-201ENSMUST00000182069 792 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm9167-201ENSMUST00000182469 962 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm28801-201ENSMUST00000188761 449 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm19185-201ENSMUST00000196365 643 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm5314-201ENSMUST00000204852 466 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm18112-201ENSMUST00000219862 1195 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC6.05□□□□□ -1.44
Lsm6P62313 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 AC132590.1-201ENSMUST00000224374 1164 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm37023-201ENSMUST00000192895 2426 ntBASIC6.05□□□□□ -1.44
Lsm6P62313 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Lsm6P62313 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.05□□□□□ -1.44
Lsm6P62313 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Larp1b-201ENSMUST00000026862 1541 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Cmah-208ENSMUST00000224819 9482 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm44584-201ENSMUST00000208395 2880 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm45793-201ENSMUST00000207900 1342 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm29761-201ENSMUST00000215964 1939 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm26416-201ENSMUST00000104280 134 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm25724-201ENSMUST00000104531 117 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm12635-201ENSMUST00000117285 752 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm11581-201ENSMUST00000122024 763 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm12665-201ENSMUST00000126063 541 ntTSL 3 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm23392-201ENSMUST00000157580 113 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm23031-201ENSMUST00000157998 119 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm17022-201ENSMUST00000166415 922 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Lsm6P62313 Mir5100-201ENSMUST00000174993 64 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm23018-201ENSMUST00000177928 109 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm19331-201ENSMUST00000193799 1092 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm43595-201ENSMUST00000196464 1071 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm42804-201ENSMUST00000199701 178 ntBASIC6.04□□□□□ -1.44
Lsm6P62313 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.04□□□□□ -1.44
Lsm6P62313 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC6.04□□□□□ -1.44
Lsm6P62313 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Lsm6P62313 AC153821.2-201ENSMUST00000220253 468 ntTSL 5 BASIC6.04□□□□□ -1.44
Lsm6P62313 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Lsm6P62313 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
Lsm6P62313 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms