Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm14540-201ENSMUST00000138298 3261 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm14935-201ENSMUST00000121528 1708 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Lyrm9-203ENSMUST00000147875 8035 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Gm10693-201ENSMUST00000144146 2037 ntBASIC9.26□□□□□ -0.93
Nphp4P59240 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.26□□□□□ -0.93
Nphp4P59240 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Nphp4P59240 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm13265-201ENSMUST00000118090 421 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Gm15158-201ENSMUST00000120577 570 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC9.25□□□□□ -0.93
Nphp4P59240 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm26557-201ENSMUST00000180756 493 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Gm18447-201ENSMUST00000187501 307 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC9.25□□□□□ -0.93
Nphp4P59240 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 AC153557.1-201ENSMUST00000217697 403 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 Olfr652-201ENSMUST00000098175 1061 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Nphp4P59240 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Nphp4P59240 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Nphp4P59240 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC9.25□□□□□ -0.93
Nphp4P59240 Acsl4-202ENSMUST00000112903 4956 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Acsl4-203ENSMUST00000112904 4959 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Spin2-ps2-201ENSMUST00000116186 778 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Gm15765-201ENSMUST00000118407 910 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Gm9506-201ENSMUST00000118516 320 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Gm11504-201ENSMUST00000120211 173 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Sms-ps-201ENSMUST00000121773 1101 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Mpv17l-202ENSMUST00000124947 768 ntTSL 3 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC9.24□□□□□ -0.93
Nphp4P59240 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm5225-201ENSMUST00000178572 324 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC9.24□□□□□ -0.93
Nphp4P59240 Nkain2-204ENSMUST00000218645 703 ntTSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 AC122327.2-201ENSMUST00000220883 120 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 AC122327.3-201ENSMUST00000221852 120 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 AC166341.1-201ENSMUST00000223360 105 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nphp4P59240 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm43880-201ENSMUST00000203635 2162 ntBASIC9.24□□□□□ -0.93
Nphp4P59240 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Nphp4P59240 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Nphp4P59240 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC9.24□□□□□ -0.93
Nphp4P59240 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Nphp4P59240 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.23□□□□□ -0.93
Nphp4P59240 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nphp4P59240 Gm11799-201ENSMUST00000116110 460 ntBASIC9.23□□□□□ -0.93
Nphp4P59240 Gm14375-201ENSMUST00000119490 855 ntBASIC9.23□□□□□ -0.93
Nphp4P59240 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC9.23□□□□□ -0.93
Nphp4P59240 Gm14038-201ENSMUST00000121500 807 ntBASIC9.23□□□□□ -0.93
Nphp4P59240 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nphp4P59240 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC9.23□□□□□ -0.93
Nphp4P59240 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC9.23□□□□□ -0.93
Nphp4P59240 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nphp4P59240 Gm37380-201ENSMUST00000193752 397 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms