Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Gm5228-201ENSMUST00000117186 357 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm15048-201ENSMUST00000118201 954 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm13196-201ENSMUST00000118297 379 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm9506-201ENSMUST00000118516 320 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm14727-201ENSMUST00000118526 525 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm15047-201ENSMUST00000118891 454 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm12955-201ENSMUST00000119689 957 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm14721-201ENSMUST00000121381 525 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Tctex1d1-203ENSMUST00000125417 859 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm9359-201ENSMUST00000163721 1221 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm3760-201ENSMUST00000167475 804 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 n-R5s93-201ENSMUST00000180091 119 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm5261-201ENSMUST00000185860 713 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm37102-201ENSMUST00000195740 1105 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 4930526M16Rik-201ENSMUST00000197305 954 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC7.08□□□□□ -1.28
Atxn1P54254 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.08□□□□□ -1.28
Atxn1P54254 AC124601.1-201ENSMUST00000220531 135 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Atxn1P54254 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Atxn1P54254 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Gm24919-201ENSMUST00000083020 106 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Atxn1P54254 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Nbas-201ENSMUST00000042953 7234 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC7.08□□□□□ -1.28
Atxn1P54254 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Atxn1P54254 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Zfp976-201ENSMUST00000098503 1976 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
Atxn1P54254 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Atxn1P54254 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.07□□□□□ -1.28
Atxn1P54254 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm8995-202ENSMUST00000208417 3490 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.07□□□□□ -1.28
Atxn1P54254 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Atxn1P54254 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Atxn1P54254 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Atxn1P54254 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm14375-201ENSMUST00000119490 855 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm11850-201ENSMUST00000119679 479 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm4886-201ENSMUST00000121874 1176 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm23187-201ENSMUST00000175746 86 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm9285-201ENSMUST00000177691 697 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Mir378d-201ENSMUST00000184232 110 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Mir7037-201ENSMUST00000184414 65 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm7867-201ENSMUST00000189856 546 ntBASIC7.07□□□□□ -1.28
Atxn1P54254 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.07□□□□□ -1.28
Atxn1P54254 Gm44422-201ENSMUST00000204142 1025 ntBASIC7.07□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms