Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Rfx1P48377 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Nlrp1a-202ENSMUST00000108518 3767 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm12021-201ENSMUST00000121061 1746 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm2080-201ENSMUST00000211299 1573 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 AC124680.1-201ENSMUST00000223923 1585 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Igkv8-28-201ENSMUST00000103380 305 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Rfx1P48377 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm11905-201ENSMUST00000117653 678 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm5255-201ENSMUST00000120125 642 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm12464-201ENSMUST00000121385 1016 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC8.74□□□□□ -1.01
Rfx1P48377 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm24530-201ENSMUST00000157948 288 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm24899-201ENSMUST00000158892 73 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm6428-201ENSMUST00000161062 345 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm17032-201ENSMUST00000164367 338 ntTSL 3 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm22408-201ENSMUST00000174925 65 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm21900-201ENSMUST00000179612 543 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm8498-201ENSMUST00000188227 974 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm37439-201ENSMUST00000193150 856 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm37108-201ENSMUST00000194605 626 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Olfr316-201ENSMUST00000203731 1011 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Rfx1P48377 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm19007-201ENSMUST00000217746 874 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm5176-201ENSMUST00000218244 1227 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm2089-201ENSMUST00000218294 479 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm4898-201ENSMUST00000218519 832 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm24035-201ENSMUST00000082867 107 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm37611-201ENSMUST00000195250 2028 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm14035-201ENSMUST00000117596 1475 ntBASIC8.74□□□□□ -1.01
Rfx1P48377 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Gm8257-202ENSMUST00000169583 1749 ntAPPRIS P5 TSL 5 BASIC8.74□□□□□ -1.01
Rfx1P48377 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Rfx1P48377 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Rfx1P48377 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm18632-201ENSMUST00000222597 2087 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 CT010470.1-201ENSMUST00000225364 1876 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm22438-201ENSMUST00000104049 132 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm12593-201ENSMUST00000120981 743 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm26408-201ENSMUST00000157672 127 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm23773-201ENSMUST00000158985 296 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm28356-202ENSMUST00000187566 858 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm29525-201ENSMUST00000189844 699 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 1700020G17Rik-202ENSMUST00000190237 739 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm29523-201ENSMUST00000191415 699 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC8.73□□□□□ -1.01
Rfx1P48377 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm18215-201ENSMUST00000204429 798 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm33096-201ENSMUST00000210189 493 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Rfx1P48377 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.73□□□□□ -1.01
Rfx1P48377 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Rfx1P48377 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC8.73□□□□□ -1.01
Rfx1P48377 AC153975.1-201ENSMUST00000220087 926 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm40853-201ENSMUST00000221342 582 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Gm9255-201ENSMUST00000223225 581 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 AC118249.1-201ENSMUST00000224822 608 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 AC163038.4-201ENSMUST00000224942 474 ntBASIC8.73□□□□□ -1.01
Rfx1P48377 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Rfx1P48377 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rfx1P48377 Gm25739-201ENSMUST00000082886 107 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms