Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm21182-201ENSMUST00000178899 794 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm6100-201ENSMUST00000180253 403 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm26662-201ENSMUST00000181129 548 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm5251-201ENSMUST00000188959 472 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm38217-201ENSMUST00000194358 910 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm43725-201ENSMUST00000200122 369 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm45319-201ENSMUST00000210220 318 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.67□□□□□ -1.5
Cdx1P18111 4930466K18Rik-201ENSMUST00000219458 906 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC132121.1-201ENSMUST00000220774 332 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Gm11360-201ENSMUST00000221898 262 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC123061.2-201ENSMUST00000226234 802 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC161877.2-201ENSMUST00000226248 545 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC130673.1-201ENSMUST00000227992 435 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC107452.2-201ENSMUST00000228415 363 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Cdx1P18111 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Olfr1392-206ENSMUST00000215861 3670 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Gm18701-201ENSMUST00000188281 1536 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.67□□□□□ -1.5
Cdx1P18111 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Cdx1P18111 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Cdx1P18111 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Dcdc5-202ENSMUST00000122388 4957 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm36950-201ENSMUST00000191738 1499 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm42975-201ENSMUST00000200612 1491 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm30165-201ENSMUST00000218769 1961 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Cdx1P18111 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm13255-201ENSMUST00000117255 547 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm12851-201ENSMUST00000117920 421 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm11922-201ENSMUST00000118967 475 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm16330-201ENSMUST00000128324 297 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.66□□□□□ -1.5
Cdx1P18111 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm23639-201ENSMUST00000175078 132 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 n-R5s115-201ENSMUST00000179019 119 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm29362-201ENSMUST00000187898 133 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm18995-201ENSMUST00000202981 520 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm8077-201ENSMUST00000209221 1024 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm45299-201ENSMUST00000210199 420 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 AC153561.1-201ENSMUST00000215943 469 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm19161-201ENSMUST00000217958 737 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC5.66□□□□□ -1.5
Cdx1P18111 Gm4796-201ENSMUST00000219802 624 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 AC118006.3-201ENSMUST00000223948 1176 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 AC129537.1-202ENSMUST00000226619 430 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 AC154649.2-201ENSMUST00000228189 808 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 n-R5s193-201ENSMUST00000082864 109 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Mir135b-201ENSMUST00000083501 97 ntBASIC5.66□□□□□ -1.5
Cdx1P18111 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Cdx1P18111 Olfr312-202ENSMUST00000216407 3776 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Cdx1P18111 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Cdx1P18111 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms