Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
Lire1P11260 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC6.84□□□□□ -1.32
Lire1P11260 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.32
Lire1P11260 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
Lire1P11260 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Lire1P11260 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Zfp935-202ENSMUST00000221747 2492 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Lire1P11260 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm13739-201ENSMUST00000118020 530 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm16016-201ENSMUST00000120831 550 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm11585-201ENSMUST00000120901 569 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm5809-201ENSMUST00000121854 529 ntBASIC6.83□□□□□ -1.32
Lire1P11260 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm22025-201ENSMUST00000122734 302 ntBASIC6.83□□□□□ -1.32
Lire1P11260 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Gm23533-201ENSMUST00000157540 245 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm10012-202ENSMUST00000170379 372 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm6838-201ENSMUST00000172851 582 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm5787-201ENSMUST00000183049 1038 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Ighv1-73-201ENSMUST00000197435 352 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm43950-201ENSMUST00000204767 996 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm29759-201ENSMUST00000205860 327 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm19007-201ENSMUST00000217746 874 ntBASIC6.83□□□□□ -1.32
Lire1P11260 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 AC147245.1-201ENSMUST00000223294 677 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm24411-201ENSMUST00000083428 131 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Gm37504-201ENSMUST00000192537 2374 ntBASIC6.83□□□□□ -1.32
Lire1P11260 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Lire1P11260 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
Lire1P11260 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Lire1P11260 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Lire1P11260 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Vmn2r61-201ENSMUST00000166131 2598 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Lire1P11260 Gm22470-201ENSMUST00000104117 130 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm14824-201ENSMUST00000119421 737 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm4914-201ENSMUST00000119757 459 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm12731-201ENSMUST00000120932 268 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Mir1907-201ENSMUST00000122509 90 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm2788-201ENSMUST00000129551 797 ntTSL 3 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm23069-201ENSMUST00000158240 311 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm18254-201ENSMUST00000185699 1204 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm18558-201ENSMUST00000186253 1214 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm43287-201ENSMUST00000197747 600 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm42983-201ENSMUST00000199879 815 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm44245-201ENSMUST00000204304 232 ntBASIC6.82□□□□□ -1.32
Lire1P11260 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.82□□□□□ -1.32
Lire1P11260 Gm33778-201ENSMUST00000216884 704 ntBASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms