Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm25722-201ENSMUST00000157498 279 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm21542-201ENSMUST00000182307 993 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Gm18447-201ENSMUST00000187501 307 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Gm18849-201ENSMUST00000189861 560 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Gm7270-201ENSMUST00000195818 1128 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 AC140930.1-201ENSMUST00000221889 389 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 AC132954.2-201ENSMUST00000222400 403 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 AC152394.1-201ENSMUST00000227360 1086 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Olfr399-201ENSMUST00000059440 1003 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Col1a1P11087 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm37138-201ENSMUST00000194564 2089 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm44916-201ENSMUST00000208664 2194 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Gm37510-201ENSMUST00000194151 4762 ntBASIC8.05□□□□□ -1.12
Col1a1P11087 Zkscan2-201ENSMUST00000042470 7831 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Col1a1P11087 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Col1a1P11087 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Efl1-205ENSMUST00000179489 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm18879-201ENSMUST00000221187 1537 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col1a1P11087 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm10862-201ENSMUST00000193956 3350 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Edar-201ENSMUST00000003312 3637 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Tubgcp6-202ENSMUST00000109353 7635 ntAPPRIS P2 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm24888-201ENSMUST00000104387 130 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Snora35-201ENSMUST00000104579 128 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm7189-201ENSMUST00000119811 429 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Gm16248-201ENSMUST00000124238 243 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC8.04□□□□□ -1.12
Col1a1P11087 Mir7020-201ENSMUST00000183787 70 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Gm29201-201ENSMUST00000189120 431 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Ighv1-27-201ENSMUST00000194473 340 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Igkv12-67-201ENSMUST00000197806 354 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 AC165292.1-201ENSMUST00000215218 620 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Gm9535-201ENSMUST00000218499 768 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Gm35619-201ENSMUST00000222548 600 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col1a1P11087 AC120375.2-202ENSMUST00000228722 397 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Col1a1P11087 Gm44121-201ENSMUST00000205169 2006 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.04□□□□□ -1.12
Col1a1P11087 AC111010.1-203ENSMUST00000227287 1548 ntBASIC8.04□□□□□ -1.12
Col1a1P11087 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Col1a1P11087 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Igf1r-201ENSMUST00000005671 11409 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Col1a1P11087 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Col1a1P11087 Tcaf3-201ENSMUST00000069023 3110 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm43970-201ENSMUST00000204346 3605 ntBASIC8.03□□□□□ -1.12
Col1a1P11087 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm3033-201ENSMUST00000112792 438 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Col1a1P11087 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.03□□□□□ -1.12
Col1a1P11087 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC8.03□□□□□ -1.12
Col1a1P11087 Gm36935-201ENSMUST00000192526 292 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms