Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm11951-201ENSMUST00000116005 431 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm11972-201ENSMUST00000118514 389 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm4914-201ENSMUST00000119757 459 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm25842-201ENSMUST00000122590 322 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm14419-203ENSMUST00000156844 752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm9149-201ENSMUST00000182724 1007 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20924-202ENSMUST00000186910 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21728-201ENSMUST00000188442 695 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21889-201ENSMUST00000188487 695 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20932-201ENSMUST00000189115 694 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21920-201ENSMUST00000190042 695 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm38306-201ENSMUST00000193954 237 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm42734-201ENSMUST00000201656 878 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm18207-201ENSMUST00000205486 526 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm45070-201ENSMUST00000208100 246 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm18192-201ENSMUST00000210174 941 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 AC134537.1-201ENSMUST00000219205 265 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 AC163041.1-201ENSMUST00000221984 133 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 CT009556.4-201ENSMUST00000227092 200 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Hba-a2-201ENSMUST00000093207 554 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.53□□□□□ -1.52
Hmgb3O54879 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hmgb3O54879 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hmgb3O54879 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hmgb3O54879 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Olfr92-202ENSMUST00000214994 2073 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm42989-201ENSMUST00000200646 2306 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Mir708-201ENSMUST00000102189 109 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm13400-201ENSMUST00000117436 380 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm11257-201ENSMUST00000121313 315 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm15079-201ENSMUST00000121943 216 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm14457-201ENSMUST00000148069 1161 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm25437-201ENSMUST00000158282 132 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm24057-201ENSMUST00000158616 302 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Mir3471-2-201ENSMUST00000174896 102 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Rps19-ps5-201ENSMUST00000180745 403 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC5.52□□□□□ -1.53
Hmgb3O54879 U90926-202ENSMUST00000201332 524 ntAPPRIS P5 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC5.52□□□□□ -1.53
Hmgb3O54879 AC091783.3-201ENSMUST00000223969 681 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 CT025639.2-201ENSMUST00000224440 1220 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Lyzl1-201ENSMUST00000025076 846 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Gm15500-201ENSMUST00000071523 894 ntBASIC5.52□□□□□ -1.53
Hmgb3O54879 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Rbms3-205ENSMUST00000111772 2234 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Hmgb3O54879 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
Hmgb3O54879 Slc25a40-202ENSMUST00000170496 2602 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms