Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Elmod2-206ENSMUST00000177594 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm6744-201ENSMUST00000119303 543 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm23050-201ENSMUST00000158775 165 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm26057-201ENSMUST00000178099 165 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm7426-201ENSMUST00000179046 404 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm17992-201ENSMUST00000207346 1072 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC122251.1-201ENSMUST00000227717 639 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC154300.1-201ENSMUST00000219735 2627 ntTSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm43534-201ENSMUST00000197685 2853 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm11737-201ENSMUST00000118713 468 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm22523-201ENSMUST00000158696 100 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm3544-201ENSMUST00000196129 305 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 AC156016.2-201ENSMUST00000228200 525 ntBASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.58□□□□□ -1.36
Col6a3E9PWQ3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Cd36-202ENSMUST00000165232 2708 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm16057-201ENSMUST00000120811 759 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm11581-201ENSMUST00000122024 763 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm26037-201ENSMUST00000158150 311 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm24050-201ENSMUST00000158623 290 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm2053-201ENSMUST00000195671 631 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Olfr678-201ENSMUST00000098160 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm12110-201ENSMUST00000121601 579 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm23259-201ENSMUST00000158318 303 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm21392-201ENSMUST00000182950 972 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm18290-201ENSMUST00000202900 844 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm10445-201ENSMUST00000203521 762 ntTSL 2 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 AC153943.1-201ENSMUST00000219312 256 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 AC105950.1-201ENSMUST00000222637 408 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 AC154846.2-201ENSMUST00000228805 424 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 7420700N18Rik-201ENSMUST00000209524 1644 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm39041-201ENSMUST00000205557 3902 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm3608-201ENSMUST00000086725 2858 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC6.57□□□□□ -1.36
Col6a3E9PWQ3 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm14563-201ENSMUST00000120571 354 ntBASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC6.56□□□□□ -1.36
Col6a3E9PWQ3 Gm26172-201ENSMUST00000158421 134 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms