Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm28952-201ENSMUST00000189285 681 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm8883-204ENSMUST00000189680 699 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm35108-201ENSMUST00000194321 699 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm33191-201ENSMUST00000195604 699 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 CT025598.1-201ENSMUST00000225140 427 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 AC122034.1-201ENSMUST00000227641 595 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 1700074P13Rik-201ENSMUST00000031935 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm12661-201ENSMUST00000118780 3335 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Snord88a-201ENSMUST00000116723 90 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Rpl15-ps1-201ENSMUST00000120694 564 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm25387-201ENSMUST00000157813 132 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm22701-201ENSMUST00000175371 291 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm27295-201ENSMUST00000184264 153 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm43233-201ENSMUST00000200491 616 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm43867-201ENSMUST00000203860 525 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm5324-201ENSMUST00000208115 476 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 AC157572.4-201ENSMUST00000228203 549 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 AC166574.7-201ENSMUST00000228502 704 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 AC154806.5-204ENSMUST00000228900 867 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Nsd2-202ENSMUST00000066854 6919 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm38315-201ENSMUST00000194286 2437 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.82□□□□□ -1.48
Col6a4A2AX52 Ugt2a2-201ENSMUST00000079811 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a4A2AX52 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm44763-201ENSMUST00000208287 2019 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm14548-201ENSMUST00000070639 2128 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 AC162301.1-201ENSMUST00000228785 1542 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Stc1-201ENSMUST00000014957 4197 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm14733-201ENSMUST00000117680 133 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm8812-201ENSMUST00000118496 412 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm8061-201ENSMUST00000122380 350 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm16027-201ENSMUST00000161618 758 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm27512-201ENSMUST00000175328 126 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15257-201ENSMUST00000177680 883 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15252-201ENSMUST00000177750 883 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15256-201ENSMUST00000177793 883 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15260-201ENSMUST00000179402 883 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm45301-201ENSMUST00000211359 933 ntTSL 5 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 AC122486.1-201ENSMUST00000221562 196 ntTSL 2 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm33312-201ENSMUST00000222443 332 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 n-R5s97-201ENSMUST00000082585 113 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Csn2-206ENSMUST00000197422 1329 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 C1s1-203ENSMUST00000160505 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Mir7020-201ENSMUST00000183787 70 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm19211-201ENSMUST00000200251 1206 ntBASIC5.81□□□□□ -1.48
Col6a4A2AX52 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.81□□□□□ -1.48
Col6a4A2AX52 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms