Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm4997-201ENSMUST00000154056 360 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm26557-201ENSMUST00000180756 493 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm37177-201ENSMUST00000193768 417 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm43762-201ENSMUST00000201521 295 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm2602-201ENSMUST00000202112 571 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm19340-201ENSMUST00000221995 345 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 CT025579.4-201ENSMUST00000224598 627 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm21731-201ENSMUST00000079524 489 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Pramel-201ENSMUST00000118979 1383 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
Scn3aA2ASI5 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 AC156645.1-201ENSMUST00000223066 5194 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm25346-201ENSMUST00000104509 128 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm14018-201ENSMUST00000119042 455 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm14614-201ENSMUST00000119873 384 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm16016-201ENSMUST00000120831 550 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm6004-201ENSMUST00000173237 1116 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 n-R5s109-201ENSMUST00000179195 119 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm29197-201ENSMUST00000185922 702 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm18447-201ENSMUST00000187501 307 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm28620-201ENSMUST00000190463 439 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm43576-201ENSMUST00000197937 871 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm19324-201ENSMUST00000213229 1169 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm5080-201ENSMUST00000220341 743 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 CT030645.2-201ENSMUST00000224321 1012 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 AC123656.1-201ENSMUST00000227121 581 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm25587-201ENSMUST00000082498 166 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Akap2-202ENSMUST00000098064 7172 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Rian-209ENSMUST00000182406 3476 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm6493-201ENSMUST00000159889 1786 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm13416-201ENSMUST00000117264 1612 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Rnu11-201ENSMUST00000104135 134 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm11271-201ENSMUST00000116054 440 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm11799-201ENSMUST00000116110 460 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm15502-201ENSMUST00000121449 208 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Sms-ps-201ENSMUST00000121773 1101 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Scgn-202ENSMUST00000142826 470 ntTSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm28023-201ENSMUST00000184556 60 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm27825-201ENSMUST00000184586 60 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Gm4556-201ENSMUST00000217808 355 ntBASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
Scn3aA2ASI5 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 AC159195.2-201ENSMUST00000223670 3757 ntBASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Prpf4b-201ENSMUST00000077853 7844 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Fmo5-203ENSMUST00000107050 5197 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.59□□□□□ -1.19
Scn3aA2ASI5 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Scn3aA2ASI5 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms