Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Gm9255-201ENSMUST00000223225 581 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 AC154390.1-201ENSMUST00000225629 277 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 AC121542.2-201ENSMUST00000227529 400 ntBASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Efna5-202ENSMUST00000078839 643 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Defa37-201ENSMUST00000084040 403 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Ube3bQ9ES34 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm38339-201ENSMUST00000195479 1829 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Smcr8-202ENSMUST00000102667 3544 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm38374-201ENSMUST00000194417 2033 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Kyat3-201ENSMUST00000044392 4206 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm6982-201ENSMUST00000118752 1560 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm7682-201ENSMUST00000098289 1443 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Cpne4-203ENSMUST00000098443 1421 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Mir683-2-201ENSMUST00000102099 109 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Mir582-201ENSMUST00000103758 81 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 n-R5s9-201ENSMUST00000104432 117 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm25725-201ENSMUST00000104528 130 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm14864-201ENSMUST00000116164 1087 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Mir467g-201ENSMUST00000116906 120 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm7974-201ENSMUST00000117154 408 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm11443-201ENSMUST00000118790 479 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm9378-201ENSMUST00000120315 471 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm16523-201ENSMUST00000121253 592 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Mir683-1-201ENSMUST00000179371 109 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm21894-201ENSMUST00000179631 546 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm28614-201ENSMUST00000186483 458 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm29355-201ENSMUST00000188178 697 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm28953-201ENSMUST00000188336 697 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm20788-201ENSMUST00000190538 697 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm37395-201ENSMUST00000194721 697 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm37481-201ENSMUST00000195176 403 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Mrpl24-201ENSMUST00000019854 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm9249-201ENSMUST00000221420 578 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Zfp874a-208ENSMUST00000225479 1092 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 AC154355.1-201ENSMUST00000224604 2162 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm36401-201ENSMUST00000194255 2028 ntBASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Ube3bQ9ES34 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Ube3bQ9ES34 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms