Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Gm44289-201ENSMUST00000204144 1390 ntBASIC6.46□□□□□ -1.37
Cdc40Q9DC48 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm13260-201ENSMUST00000117797 1264 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm14727-201ENSMUST00000118526 525 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm15186-201ENSMUST00000119345 563 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm14721-201ENSMUST00000121381 525 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm23740-201ENSMUST00000157385 100 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm26183-201ENSMUST00000157685 139 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm16138-201ENSMUST00000159341 821 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm19480-201ENSMUST00000185547 667 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm9127-201ENSMUST00000188041 985 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm28117-201ENSMUST00000188472 371 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm42711-201ENSMUST00000197060 2302 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm43656-201ENSMUST00000197882 434 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm2860-201ENSMUST00000199226 707 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 AC151971.2-201ENSMUST00000217540 909 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm10126-201ENSMUST00000221732 168 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm36758-201ENSMUST00000222594 310 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 CT009711.4-201ENSMUST00000225685 198 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 AC154324.1-201ENSMUST00000226711 814 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 CT030238.3-201ENSMUST00000227352 875 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 CT025630.2-201ENSMUST00000228293 487 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Mir484-201ENSMUST00000093566 67 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Cdc40Q9DC48 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Rnase4-201ENSMUST00000022428 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm37234-201ENSMUST00000193259 1441 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm26419-201ENSMUST00000104272 133 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm25379-201ENSMUST00000104338 114 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Klhl10-202ENSMUST00000107395 932 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm11858-201ENSMUST00000117935 838 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm12740-201ENSMUST00000118794 308 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm14869-201ENSMUST00000119007 884 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm12804-201ENSMUST00000121030 999 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm24057-201ENSMUST00000158616 302 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm24680-201ENSMUST00000158759 126 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm16026-205ENSMUST00000162923 641 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm25617-201ENSMUST00000179548 133 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm5261-201ENSMUST00000185860 713 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm37526-201ENSMUST00000194640 619 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm25617-202ENSMUST00000198387 132 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 AC124184.1-201ENSMUST00000218167 283 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm35638-201ENSMUST00000220724 652 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm16020-201ENSMUST00000084281 210 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Defb46-201ENSMUST00000095436 174 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 CT009757.6-201ENSMUST00000220661 2312 ntBASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Cdc40Q9DC48 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms