Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Use1Q9CQ56 Gm37541-201ENSMUST00000192464 2315 ntBASIC6.48□□□□□ -1.37
Use1Q9CQ56 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Use1Q9CQ56 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Use1Q9CQ56 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Use1Q9CQ56 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm10735-201ENSMUST00000099162 2943 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Mcm7-208ENSMUST00000148879 1351 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Triqk-203ENSMUST00000183345 3545 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm37163-201ENSMUST00000195439 1690 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Fmn1-201ENSMUST00000081349 4235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm7831-201ENSMUST00000117990 552 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm12879-201ENSMUST00000120003 1182 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm7546-201ENSMUST00000146119 966 ntTSL 3 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm28285-204ENSMUST00000187793 601 ntAPPRIS P5 TSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm28117-201ENSMUST00000188472 371 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 AC153955.3-201ENSMUST00000216787 646 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm33167-201ENSMUST00000201933 2643 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Gm13749-201ENSMUST00000133244 1432 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Rab11fip2-203ENSMUST00000171986 5363 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 AC155234.1-201ENSMUST00000225610 2823 ntBASIC6.47□□□□□ -1.37
Use1Q9CQ56 Olfr930-202ENSMUST00000217208 1313 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.47□□□□□ -1.37
Use1Q9CQ56 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Grik2-202ENSMUST00000105484 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Use1Q9CQ56 AC162301.1-201ENSMUST00000228785 1542 ntBASIC6.46□□□□□ -1.37
Use1Q9CQ56 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
Use1Q9CQ56 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr1396-204ENSMUST00000215553 4237 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 n-R5s9-201ENSMUST00000104432 117 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm24986-201ENSMUST00000104452 132 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm12727-201ENSMUST00000119885 359 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Mir1231-201ENSMUST00000175639 81 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm28665-201ENSMUST00000189269 670 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm3103-201ENSMUST00000198073 752 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Klra13-ps-203ENSMUST00000204367 850 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm44565-201ENSMUST00000208194 269 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm7789-201ENSMUST00000210473 701 ntTSL 3 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm18655-201ENSMUST00000214802 1090 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 4930503E24Rik-202ENSMUST00000219657 942 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 AC129017.2-201ENSMUST00000226118 1284 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm10845-202ENSMUST00000228217 3389 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 AC154806.5-204ENSMUST00000228900 867 ntBASIC6.46□□□□□ -1.38
Use1Q9CQ56 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Ube2v2-203ENSMUST00000115777 4207 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Use1Q9CQ56 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms