Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Pax4-205ENSMUST00000174194 974 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm24327-201ENSMUST00000175108 78 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm25690-201ENSMUST00000175439 77 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm21965-201ENSMUST00000177770 384 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm5435-201ENSMUST00000179295 1150 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm21638-201ENSMUST00000179473 836 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11109-201ENSMUST00000180289 384 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm24969-201ENSMUST00000180331 79 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28700-201ENSMUST00000187614 579 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm29335-201ENSMUST00000188361 459 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm7893-201ENSMUST00000189666 225 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm43461-201ENSMUST00000202351 996 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm44426-201ENSMUST00000204258 355 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm44952-201ENSMUST00000204443 433 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm15738-205ENSMUST00000210378 1051 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm43154-213ENSMUST00000210985 932 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 AC140264.1-201ENSMUST00000220023 469 ntTSL 3 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr231-201ENSMUST00000063030 924 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr914-202ENSMUST00000217057 4948 ntAPPRIS P1 TSL 3 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 AC158981.2-201ENSMUST00000227565 1537 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Eps15-202ENSMUST00000102729 5190 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Il1r2-201ENSMUST00000027243 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 AC113031.7-201ENSMUST00000228609 1928 ntBASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC8.37□□□□□ -1.07
Pcdhb3Q91XZ7 Muc5ac-203ENSMUST00000163321 8505 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Trim16-201ENSMUST00000055006 3906 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm26745-201ENSMUST00000181022 1874 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm43154-206ENSMUST00000209562 1884 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Xlr3b-201ENSMUST00000101486 1564 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Olfr1006-202ENSMUST00000216084 1572 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 AC105407.2-205ENSMUST00000224680 2733 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Adgrl4-201ENSMUST00000046977 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Ddias-201ENSMUST00000032877 3387 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Ear-ps2-201ENSMUST00000100689 466 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Snora17-201ENSMUST00000104004 132 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Eri2-203ENSMUST00000106523 973 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm11951-201ENSMUST00000116005 431 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm12268-201ENSMUST00000118398 442 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm15193-201ENSMUST00000120224 865 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14394-201ENSMUST00000120307 295 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14600-201ENSMUST00000121032 630 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm14514-201ENSMUST00000121680 940 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm16077-201ENSMUST00000121915 655 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm9141-201ENSMUST00000159355 1007 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Ang-ps1-201ENSMUST00000162314 436 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Dnajc5b-204ENSMUST00000165693 955 ntAPPRIS P1 TSL 3 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28560-201ENSMUST00000186091 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28334-201ENSMUST00000186653 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 1700120C14Rik-201ENSMUST00000187706 326 ntTSL 2 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28495-201ENSMUST00000188452 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28232-201ENSMUST00000188683 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm28481-201ENSMUST00000189231 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm29059-201ENSMUST00000191534 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Trbv22-201ENSMUST00000191697 291 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm37765-201ENSMUST00000192395 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm37237-201ENSMUST00000192893 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm36968-201ENSMUST00000193737 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm38290-201ENSMUST00000195238 315 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm42594-201ENSMUST00000199511 246 ntBASIC8.36□□□□□ -1.07
Pcdhb3Q91XZ7 Gm31230-201ENSMUST00000199725 785 ntBASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms