Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 AC170999.2-201ENSMUST00000226223 264 ntBASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Tet2-201ENSMUST00000098603 9179 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Gm44229-201ENSMUST00000203211 2487 ntBASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Gm45657-201ENSMUST00000211318 1349 ntBASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Gm37087-201ENSMUST00000192966 3309 ntBASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Gm37752-201ENSMUST00000193494 3309 ntBASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Ccdc9Q8VC31 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm45117-201ENSMUST00000207250 1774 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Il1b-201ENSMUST00000028881 1356 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm38105-201ENSMUST00000192112 2621 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr75-ps1-202ENSMUST00000141956 2500 ntTSL 2 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Kcnma1-201ENSMUST00000065788 4524 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm15154-201ENSMUST00000117590 366 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm11911-201ENSMUST00000117938 1023 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm22552-201ENSMUST00000157796 337 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm25372-201ENSMUST00000158161 255 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm23007-201ENSMUST00000158951 177 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm7031-201ENSMUST00000173709 919 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Mir7115-201ENSMUST00000184275 64 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Mark1-ps3-201ENSMUST00000184922 694 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Ighv1-10-201ENSMUST00000194372 355 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm4259-201ENSMUST00000206489 758 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm4548-201ENSMUST00000208487 509 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm9689-201ENSMUST00000210009 428 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm2915-201ENSMUST00000222565 787 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 AC154627.1-201ENSMUST00000228799 1286 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm5286-201ENSMUST00000159524 1593 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Rbmy-201ENSMUST00000100360 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm10256-202ENSMUST00000188114 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm21708-203ENSMUST00000190283 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm7265-201ENSMUST00000192735 3502 ntBASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Hormad2-203ENSMUST00000109949 1343 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Ccdc9Q8VC31 Bcap29-202ENSMUST00000177962 6155 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm9239-201ENSMUST00000186942 2557 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm14895-201ENSMUST00000121858 1361 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm41-201ENSMUST00000116183 1023 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm8688-201ENSMUST00000118240 969 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm24011-201ENSMUST00000157732 268 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm6428-201ENSMUST00000161062 345 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm25082-201ENSMUST00000177296 255 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm5973-201ENSMUST00000178542 496 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Vmn2r-ps24-201ENSMUST00000199364 858 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.24□□□□□ -1.09
Ccdc9Q8VC31 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms