Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm38697-201ENSMUST00000198061 1746 ntBASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm45601-201ENSMUST00000211483 6753 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Thap6-201ENSMUST00000191860 3151 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 n-R5s9-201ENSMUST00000104432 117 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm24473-201ENSMUST00000104483 131 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Klrd1-202ENSMUST00000112063 895 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm27507-201ENSMUST00000184199 93 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm17847-201ENSMUST00000188261 1127 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37493-201ENSMUST00000193167 433 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 1700039M15Rik-201ENSMUST00000195377 1120 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm19185-201ENSMUST00000196365 643 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 AC150661.1-201ENSMUST00000222563 495 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 AC157650.2-201ENSMUST00000224666 328 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 CT025667.1-201ENSMUST00000225872 382 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 AC130219.2-201ENSMUST00000228765 807 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr566-203ENSMUST00000213481 2040 ntAPPRIS ALT1 TSL 3 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Gm38381-201ENSMUST00000193594 2275 ntBASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Ccdc28aQ8CEI3 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm28874-201ENSMUST00000190917 3134 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 AC165260.6-206ENSMUST00000223884 3698 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm14279-201ENSMUST00000117142 332 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm13400-201ENSMUST00000117436 380 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10243-201ENSMUST00000117571 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm13237-201ENSMUST00000122151 635 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm8577-201ENSMUST00000122420 986 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm20430-201ENSMUST00000172474 207 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm6610-201ENSMUST00000186324 358 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29470-201ENSMUST00000188007 696 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm37585-201ENSMUST00000195440 280 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm7663-201ENSMUST00000201151 1240 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm5305-201ENSMUST00000204010 746 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm2221-201ENSMUST00000209342 418 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm2767-201ENSMUST00000209582 473 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm45764-201ENSMUST00000213047 571 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10126-201ENSMUST00000221732 168 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm5436-201ENSMUST00000058103 643 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm23238-201ENSMUST00000083007 164 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Gm10247-201ENSMUST00000090395 333 ntBASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
Ccdc28aQ8CEI3 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms