Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37017-201ENSMUST00000195266 747 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm6101-201ENSMUST00000195384 1867 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm25617-202ENSMUST00000198387 132 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm42734-201ENSMUST00000201656 878 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Olfr1106-202ENSMUST00000213781 2569 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Olfr1241-202ENSMUST00000214743 2328 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Olfr1106-203ENSMUST00000217650 2573 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 AC108947.1-201ENSMUST00000224274 1000 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gpr87-201ENSMUST00000056898 1080 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm10388-201ENSMUST00000205001 2936 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 AC122356.1-202ENSMUST00000227328 2758 ntBASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Vmn1r51-201ENSMUST00000072859 2567 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
Vps53Q8CCB4 Vmn2r10-201ENSMUST00000079163 2544 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 CT009757.6-201ENSMUST00000220661 2312 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm2108-201ENSMUST00000165058 2177 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Tmem236-201ENSMUST00000077517 3659 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm37653-201ENSMUST00000195401 3578 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm18830-201ENSMUST00000199036 1396 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15203-201ENSMUST00000117668 455 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm11903-201ENSMUST00000118958 727 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm6142-201ENSMUST00000120290 325 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm15188-201ENSMUST00000121264 704 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Cnih1-202ENSMUST00000146629 789 ntTSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm37383-201ENSMUST00000191750 745 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm37260-201ENSMUST00000193748 1251 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 AC069561.1-201ENSMUST00000213750 424 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Gm22865-201ENSMUST00000083949 214 ntBASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
Vps53Q8CCB4 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Sugt1-201ENSMUST00000054908 7392 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Vps53Q8CCB4 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Arf4-202ENSMUST00000112318 1367 ntTSL 5 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm25877-201ENSMUST00000104326 129 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Rhox4g-201ENSMUST00000115166 979 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm13006-201ENSMUST00000118683 214 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Mir199b-201ENSMUST00000175066 110 ntBASIC8.14□□□□□ -1.11
Vps53Q8CCB4 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms