Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm43029-201ENSMUST00000201829 1535 ntBASIC7.57□□□□□ -1.2
Trim9Q8C7M3 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Trim9Q8C7M3 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Trim9Q8C7M3 Nr2c1-203ENSMUST00000105290 3732 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm25724-201ENSMUST00000104531 117 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm11889-201ENSMUST00000118402 1079 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm15242-201ENSMUST00000122459 283 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm24442-201ENSMUST00000157238 327 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm22915-201ENSMUST00000157615 136 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm2976-201ENSMUST00000160362 513 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gml-202ENSMUST00000164026 895 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm3344-201ENSMUST00000169610 603 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm27001-201ENSMUST00000182252 936 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm28439-201ENSMUST00000187714 876 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm37383-201ENSMUST00000191750 745 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm42919-201ENSMUST00000197753 1284 ntBASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Trim9Q8C7M3 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm31049-201ENSMUST00000201516 1302 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm45073-201ENSMUST00000207688 4247 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Zfp934-209ENSMUST00000222746 2206 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm43022-201ENSMUST00000197067 4268 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Asap1-206ENSMUST00000175799 4237 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm25916-201ENSMUST00000104263 131 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm14550-201ENSMUST00000117918 407 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Nedd8-202ENSMUST00000163750 514 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm7972-201ENSMUST00000208434 1137 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm18914-201ENSMUST00000214625 616 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm2139-201ENSMUST00000222569 1075 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Ly6c1-201ENSMUST00000065408 844 ntAPPRIS P3 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Mir135a-1-201ENSMUST00000083473 90 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Olfr3-202ENSMUST00000213988 2018 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm37518-201ENSMUST00000194930 2603 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm45290-201ENSMUST00000211177 3890 ntBASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Nipa2-203ENSMUST00000119041 2979 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim9Q8C7M3 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms