Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Gm43556-201ENSMUST00000196186 681 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Gm5995-201ENSMUST00000204107 1273 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Ptcd1Q8C2E4 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Sec16b-202ENSMUST00000086130 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Ptcd1Q8C2E4 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm37770-201ENSMUST00000192855 772 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 4930566N20Rik-201ENSMUST00000195173 1199 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm44561-201ENSMUST00000208869 264 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Olfr494-202ENSMUST00000210291 947 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm31013-201ENSMUST00000213576 715 ntTSL 3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC122360.1-201ENSMUST00000217737 624 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm8290-201ENSMUST00000218202 477 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm8137-201ENSMUST00000218997 463 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC158523.2-201ENSMUST00000222708 548 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC131068.1-201ENSMUST00000226891 482 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC137902.2-201ENSMUST00000227989 576 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm24696-201ENSMUST00000083878 134 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Zbtb18-201ENSMUST00000077225 4944 ntAPPRIS P3 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm44763-201ENSMUST00000208287 2019 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 AC061963.2-201ENSMUST00000213541 2739 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm16123-201ENSMUST00000118647 1517 ntBASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 Fnbp1-201ENSMUST00000073879 8469 ntTSL 5 BASIC9.46□□□□□ -0.9
Ptcd1Q8C2E4 BC048644-201ENSMUST00000140928 3522 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Gm43528-201ENSMUST00000199492 1674 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Gm18451-201ENSMUST00000196759 1719 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Cebpz-201ENSMUST00000024885 4074 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Chd8-212ENSMUST00000200169 8509 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Gm12636-201ENSMUST00000117395 624 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Gm12713-201ENSMUST00000118404 764 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Gm13252-201ENSMUST00000119355 321 ntBASIC9.45□□□□□ -0.9
Ptcd1Q8C2E4 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 236.6 ms