Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm17764-201ENSMUST00000185925 391 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm28188-201ENSMUST00000190483 236 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm20186-203ENSMUST00000202542 741 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm44134-202ENSMUST00000204777 545 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm44566-201ENSMUST00000207638 304 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm5183-201ENSMUST00000219409 629 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 CT025536.1-201ENSMUST00000226744 844 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm25815-201ENSMUST00000082755 107 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Acsm2-201ENSMUST00000084647 2051 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Ccnd1-201ENSMUST00000093962 3740 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gm7208-202ENSMUST00000212442 1627 ntBASIC9.66□□□□□ -0.86
Trim35Q8C006 1700017G19Rik-201ENSMUST00000035860 2437 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim35Q8C006 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Syt11-202ENSMUST00000107503 3575 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Rab5b-201ENSMUST00000000727 3180 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC9.66□□□□□ -0.86
Trim35Q8C006 CT572998.1-201ENSMUST00000219636 1557 ntTSL 3 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Trpv2-202ENSMUST00000102643 2650 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Ddx24-206ENSMUST00000221211 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Bcas1-203ENSMUST00000109152 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trim35Q8C006 Gfm2-209ENSMUST00000161825 4416 ntTSL 2 BASIC9.66□□□□□ -0.86
Trim35Q8C006 Fndc1-202ENSMUST00000097425 5845 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm42777-201ENSMUST00000196026 3603 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Ankmy1-202ENSMUST00000160548 3246 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Arfgef2-201ENSMUST00000099078 8770 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gdi2-201ENSMUST00000059515 2077 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Zc3h10-201ENSMUST00000040572 3721 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Cul4b-201ENSMUST00000016681 3354 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 AC120163.1-201ENSMUST00000228618 1680 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Rhbdf2-201ENSMUST00000103028 3855 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm13914-201ENSMUST00000118202 991 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm5073-201ENSMUST00000118222 820 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm13082-201ENSMUST00000118877 561 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm26486-201ENSMUST00000158021 110 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm25334-201ENSMUST00000158036 110 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm22940-201ENSMUST00000158560 155 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm22136-201ENSMUST00000158751 268 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm17051-201ENSMUST00000170787 487 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm379-201ENSMUST00000178160 888 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm9621-201ENSMUST00000183322 1003 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Mir8113-201ENSMUST00000184956 129 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm28857-201ENSMUST00000188068 425 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm19280-201ENSMUST00000190191 205 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm7776-201ENSMUST00000191211 720 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.65□□□□□ -0.86
Trim35Q8C006 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm45349-201ENSMUST00000210285 1074 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 AC112157.1-201ENSMUST00000226016 543 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Klk1b4-201ENSMUST00000077354 839 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm8412-201ENSMUST00000077493 440 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Psme1-201ENSMUST00000089619 711 ntTSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Epb41l3-215ENSMUST00000225977 3188 ntAPPRIS ALT2 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trim35Q8C006 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
Trim35Q8C006 Gm43499-201ENSMUST00000202091 2107 ntBASIC9.65□□□□□ -0.86
Trim35Q8C006 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim35Q8C006 Zfp959-201ENSMUST00000054780 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim35Q8C006 Dhx30-203ENSMUST00000165596 3726 ntTSL 5 BASIC9.65□□□□□ -0.87
Trim35Q8C006 Fam216b-202ENSMUST00000118785 1447 ntTSL 5 BASIC9.65□□□□□ -0.87
Trim35Q8C006 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.87
Trim35Q8C006 Fndc9-201ENSMUST00000060185 2290 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trim35Q8C006 Gpr160-201ENSMUST00000046748 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm38910-201ENSMUST00000204630 2448 ntBASIC9.64□□□□□ -0.87
Trim35Q8C006 Kansl3-204ENSMUST00000185912 4527 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Gm19757-201ENSMUST00000205113 2946 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Ncor1-202ENSMUST00000037575 4246 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Tulp2-203ENSMUST00000107758 1597 ntTSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Olfr559-202ENSMUST00000215657 1560 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
Trim35Q8C006 Dhrs7b-201ENSMUST00000042281 1553 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Trim35Q8C006 Amz2-201ENSMUST00000020929 1811 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms