Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 AC125064.1-201ENSMUST00000225801 295 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Usp40Q8BWR4 Gm37647-201ENSMUST00000194556 3143 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm15789-201ENSMUST00000118992 1359 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm43410-201ENSMUST00000197510 2234 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Cntn5-201ENSMUST00000074133 3297 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 6720475M21Rik-201ENSMUST00000201755 2753 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm37022-201ENSMUST00000192517 2254 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm24790-201ENSMUST00000104285 132 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm12842-201ENSMUST00000117298 476 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm13669-201ENSMUST00000122366 457 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm20454-201ENSMUST00000172713 221 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm42673-201ENSMUST00000202676 337 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 AC153968.2-201ENSMUST00000215579 1140 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm46203-201ENSMUST00000218130 478 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Olfr809-203ENSMUST00000218237 1100 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 AC124601.1-201ENSMUST00000220531 135 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 AC132433.1-201ENSMUST00000221553 1101 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Acbd7-202ENSMUST00000228935 534 ntAPPRIS ALT1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Il20-201ENSMUST00000027673 1186 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm22581-201ENSMUST00000083735 136 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 AC159264.1-201ENSMUST00000224844 4257 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm43970-201ENSMUST00000204346 3605 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Gm44777-201ENSMUST00000205941 4052 ntBASIC9.51□□□□□ -0.89
Usp40Q8BWR4 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm26340-201ENSMUST00000102365 99 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm26144-201ENSMUST00000104475 132 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm13006-201ENSMUST00000118683 214 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm12754-201ENSMUST00000121908 454 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm23740-201ENSMUST00000157385 100 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm25722-201ENSMUST00000157498 279 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm29011-201ENSMUST00000191059 712 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 AC124537.2-201ENSMUST00000220872 883 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm40932-202ENSMUST00000221315 511 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm6575-201ENSMUST00000222946 697 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 AC132833.4-201ENSMUST00000228313 203 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 AC135086.1-201ENSMUST00000228621 817 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Mir138-1-201ENSMUST00000083480 99 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm44194-201ENSMUST00000204222 3229 ntBASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Gm13403-201ENSMUST00000127936 3651 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Usp40Q8BWR4 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Gm37906-201ENSMUST00000192050 3035 ntBASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Usp40Q8BWR4 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms