Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm14380-201ENSMUST00000122298 431 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm12778-201ENSMUST00000122341 333 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Scnm1-202ENSMUST00000173462 666 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm9285-201ENSMUST00000177691 697 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm27804-201ENSMUST00000185135 119 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm21877-201ENSMUST00000185640 694 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm29663-201ENSMUST00000186962 853 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm18469-201ENSMUST00000208850 439 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm4042-201ENSMUST00000216946 637 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Fxyd4-201ENSMUST00000005114 1199 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Hmg20a-201ENSMUST00000034879 3778 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm43533-201ENSMUST00000202933 2936 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm6101-201ENSMUST00000195384 1867 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Rdx-203ENSMUST00000163153 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Zfp874a-201ENSMUST00000057241 2210 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Pramel-201ENSMUST00000118979 1383 ntBASIC6.06□□□□□ -1.44
Nkx3-1P97436 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Nkx3-1P97436 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 A930038B10Rik-201ENSMUST00000180412 4084 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm43581-201ENSMUST00000196766 2864 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 AC158938.1-201ENSMUST00000225372 6720 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Eif4e-201ENSMUST00000029803 4991 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm14865-201ENSMUST00000117523 494 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm12573-201ENSMUST00000118158 286 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm14612-201ENSMUST00000121522 881 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm11609-201ENSMUST00000121926 793 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm22024-201ENSMUST00000122733 287 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm3326-201ENSMUST00000164656 1043 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm4373-201ENSMUST00000178571 556 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm7891-201ENSMUST00000190284 843 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm44943-201ENSMUST00000207254 300 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 AC121997.2-202ENSMUST00000227158 939 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Tas2r134-201ENSMUST00000070028 898 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Med12-203ENSMUST00000117203 6816 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 AC124680.1-201ENSMUST00000223923 1585 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.05□□□□□ -1.44
Nkx3-1P97436 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Nkx3-1P97436 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Nkx3-1P97436 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx3-1P97436 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx3-1P97436 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Nkx3-1P97436 Urb2-201ENSMUST00000034457 5853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms